SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for H12C20.6a from Caenorhabditis elegans WormBase WS218

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  H12C20.6a
Domain Number 1 Region: 167-383
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.67e-39
Family Nuclear receptor ligand-binding domain 0.0008
Further Details:      
 
Domain Number 2 Region: 6-90
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.02e-29
Family Nuclear receptor 0.00027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: H12C20.6a   Protein: CE31964   Gene: WBGene00003691
Sequence length 391
Comment CE31964 WBGene00003691 locus:nhr-101 status:Confirmed UniProt:Q95ZS3 protein_id:CAC42310.2
Sequence
MQFEELCLVCNDLSSGYHYGVPSCNGCKTFFRRTIMKKQLFVCQHEKNCPVDKSIRCACR
FCRFEKCIQVGMDKSALQASRDRIGYTKRTRKPKTKDVSFSSSSEMSPGSYFAESPGYAQ
KAFETYWSYVVSREKASNEMRLSDYLPKRSLKEALCSKSLLNDPIFLSKYALPSSKHTYT
SLRFITQTDYHYWHERDWFVLTEYAKTFKIFEALSYADKAELVRHSAITLPALNQVYNSP
DHGLDTVVFPDGTYYDRTHEPTRPSGLNRKKYQVLDLVLKPFREIDINFNEFAAFKAITF
LNPDADVSLQAKLAINEERISVTKQLYDYMVRNDGIEKAIKRFSRLILIGTSMSKMACES
KEAVWIADFFENIGYTSFAKELFFGDYDSDV
Download sequence
Identical sequences Q95ZS3
NP_001041141.1.50509 H12C20.6a H12C20.6a 6239.H12C20.6a H12C20.6a

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]