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  Home > Genomes > Caenorhabditis elegans WormBase WS218 > ZK1151.1d

Domain assignment for ZK1151.1d from Caenorhabditis elegans WormBase WS218

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ZK1151.1d
Domain Number 1 Region: 13-255
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 6.61e-64
Family Calponin-homology domain, CH-domain 0.0000287
Further Details:      
 
Domain Number 2 Region: 1783-1928,1970-2027,2071-2092
Classification Level Classification E-value
Superfamily Plakin repeat 1.44e-33
Family Plakin repeat 0.0065
Further Details:      
 
Domain Number 3 Region: 1452-1660
Classification Level Classification E-value
Superfamily Plakin repeat 6.28e-28
Family Plakin repeat 0.0034
Further Details:      
 
Domain Number 4 Region: 2833-3001
Classification Level Classification E-value
Superfamily Plakin repeat 1.13e-27
Family Plakin repeat 0.0033
Further Details:      
 
Domain Number 5 Region: 2435-2599
Classification Level Classification E-value
Superfamily Plakin repeat 1.4e-24
Family Plakin repeat 0.0036
Further Details:      
 
Domain Number 6 Region: 2185-2248,2305-2387
Classification Level Classification E-value
Superfamily Plakin repeat 2.44e-22
Family Plakin repeat 0.0061
Further Details:      
 
Domain Number 7 Region: 2680-2861
Classification Level Classification E-value
Superfamily Plakin repeat 2.88e-18
Family Plakin repeat 0.0097
Further Details:      
 
Domain Number 8 Region: 2977-3127
Classification Level Classification E-value
Superfamily Plakin repeat 6.02e-18
Family Plakin repeat 0.0024
Further Details:      
 
Domain Number 9 Region: 1143-1262,1295-1321
Classification Level Classification E-value
Superfamily Spectrin repeat 1.57e-17
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 10 Region: 656-785,846-870
Classification Level Classification E-value
Superfamily Spectrin repeat 8.23e-17
Family Spectrin repeat 0.0079
Further Details:      
 
Domain Number 11 Region: 1688-1802
Classification Level Classification E-value
Superfamily Plakin repeat 0.000000000000458
Family Plakin repeat 0.02
Further Details:      
 
Domain Number 12 Region: 3219-3315
Classification Level Classification E-value
Superfamily Plakin repeat 0.0000000000288
Family Plakin repeat 0.0046
Further Details:      
 
Domain Number 13 Region: 262-370
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000326
Family Spectrin repeat 0.0029
Further Details:      
 
Domain Number 14 Region: 956-1049
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000366
Family Spectrin repeat 0.0085
Further Details:      
 
Domain Number 15 Region: 507-600
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000017
Family Spectrin repeat 0.0067
Further Details:      
 
Weak hits

Sequence:  ZK1151.1d
Domain Number - Region: 779-836
Classification Level Classification E-value
Superfamily SH3-domain 0.00138
Family SH3-domain 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: ZK1151.1d   Protein: CE36460   Gene: WBGene00006876
Sequence length 3405
Comment CE36460 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ5 protein_id:CAH04740.1
Sequence 
MVGERYRSHHAVDPSDAQEKEVLDHYELNREKYNDERDNVQKKTFTKWVNKHLSKTDHKI
DDLFVDLRDGYALIALLEALTGERIQKENGYTRFHRIQNVQYCLDFLKKKNVSVIRQRLL
LESSQHEQMSAKHTTTNSQVSLHGSDATSARDALLQWARRVTAGYPRVNVNNFSSSWRDG
LAFNAILHRYRSSAIDWNKISSDSVSNTERLNNAFAAADREFGVERLLDAEDVDTNNPDE
KSIITYVSSLYNALPHEPEMSRLQKVQEEYIEEAYEWREWVVRAIQLVDDRHLQGTASEL
IYELQRFREDDLPPREEQKRRLTLVYEHLEKVMRSTELFAIPHELSAPELQRVWNELQNS
IDRRFDVLERHRIQEGNSNDLLSRLARGIGITNEKLDLILKRIEDVEARVDTSPPAAVER
TVSEIVDDLNALESPIARFFEDVEELKSMQHPEANDFYKQVYGLHQRRTTYLDRLTNQIL
VRLGVRTDSLHKENQQRLENMRKTSFSRVEECIEWVRVRMEKLTTMEFLEDLETLEHVFE
QHKFDNRDIQDFRQNVDECIARQAEVSAEDTYEYCELLRVLESEYQQLRDLSAGRMLDLD
SLIAFVRAAQLELIWVSERESIEVTRNWSDIKQLDLPMLTNYYKQLLHEMELREKQYNDV
HNQGAALLNQGHPAIRVIEVYLRQMQSQWDWLLALSKCLEEHLRDALNLKSFMEEASDAE
AWIQEQSVRLENNYNRTDFSLEEGERFLRELDEIKEILNKYHQVLMALTERCASISPLWQ
RGERIPHPIKVTALCDYSDENVTIKAGDDVYLLDNSDLIKWTIRDISGAEGQVPSVVFRI
PPTDARLTALLNRLLQQFEKLKKLWDKKHRMVRFNMVLNTMRTIQGWDLDTFNSIDPDQR
DAIMKALNDDANKLLSELDPNDPLALRLREELRRTNEHFWNLLNASQKPPEPDWASQYDQ
KMAELLKKLEEAWRELNDAVGKPISRSPEDLERVIHAHKRFEDALQALDSDVANVKELFR
QLPNPTPTQRVNHDRLNGLWDDLWDLSRMYVERIKVLESVLNGMVEVADIVRQHEITLNS
FDDLPAALDKLRGHHSQLLEINMVLKVSKLGAQNEHFSQQQTVIDQLNRNVALLRQHVSR
TRINEGHHPDVDAIEDEVQKLNVRWENVNSQIASRLLAVESALQIQMVYRSEYETEMSWL
DTVEETINRLRKPEELRPEQYQQQLDMLIAEYTNLQEHTQAIEHVNKEGGRFIHEAKIFD
AKLGQYSDGIVGIHGPGIKSEFRRTKPQPKNGSQIVTEELELLNRRFAQLSSLILERRNT
MQVLIQNWKRQKQEEEDRRRAEEEEKRRAFEAARLKALEDAERLRREREDAEARRRAKDD
ADRARRMAEDAERARREAEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRRE
EEEKRRKKPDFDLKIQKPTMNIEPVVTSAGDEWEIVDPIGDRAKISEVEDEMQTFAEETI
TNTQFYEMEGNLNKKTGEVLTFIEAIRQGNLTAAGQFFDIPSASVMSLEEAAKYGLVEQD
LPTVLNTTWGIHHPETRQPITLSEAIRIGLYDSNIRQFRDIHTGEILSQSDLMSKGIANW
ETVLKLIKEKIMKLPPTSLANALEKRMVDPQTGVFKGRTTDMELQLWAAIYHGYLSIENP
EHVTTIGTSLTDAIENGFINANNAEFNDRNSNDSFKLRDAVSKRTGLINNDVVEIVQMTD
DEKKRVPLGAALVRNVIGVKDGKYTNLASRQSMSLKEAHQDGLIGKALTLEEAAQNKLVD
SSGYFVDRGILGQRYTLLEAIVAGLIDAEVRHIVDPNENDVISISEAMERGLLLPNGKIV
LEKDEKEFTIPEAVHEGLLTKRVRHSIFNIRGIRNTETSQNLSFNEAVEAGVIIPNAERV
VDLQTQESFLITDDRAKNLIEVALHELLTTPVGIKNDRGAYELNLVRAVSSGIIDPVKGV
FFNKNTKHELSTKEAYEQGFITLRGALKVFGLLNVPPALVTPAKKLDRTRRIGRPGQEGG
ADGNHVTVTLQDAMRQGLVGNQRYVHGKVDLSLEEALNRGLLDPNSQWIMPDQSKGDGPT
IEEKTTETMTETGQQLAPKYFPDKNIEESVTTVKRVRTTETTALGGPGGVSVYRSIAGGK
GALEVPSRGYHIYEAERKGLIDLTNGKISAPNVDRVLSFAEGIELGIIDATTIQVSTGGR
SVSVKEALEKKIMESDGSVNGRNIEQAVEAKTIVIDAEPLVPYNNQSKNIIQIPSGNGPI
ISFRQVGQPVVEESTQSWEFDTQQGVFVDNLTGEKLSLERALATGKVAPEDISVRDGLTG
REMPLEEAEKWGIIDSKNRYYFDKSQNKRMSYTEAAQQHLMYLTGGVPENASDAVHTTVK
VQTRTAVAKKEALSSGLPLSDYSLGKALSLGWYDQSAGTFTHPETQKQLTLKEAIMKGLF
DPYDTTIVDKKAGKEISLLEAIREEIVDDNAGTVKDTQTGRVHNFLEAGNLGLVKGKNFG
DTLDSSLFSGRLDLGSGSYTRPSGGSSMPIHEAINRNYVDRSSVSVRDPSSGQQYSYQEA
VDRRIVDADRGLIHGGGDSTSFSQGLTSGHLVSSGSSRPTSGNQSRLVEQRLQLTPFAPN
GGAGRSRDGRHELVDLGGGQQVQVKVVRGEGGVEKGEYTDPKSGMKFTIQMHGDPVVTET
KTSVKSTSQVHSVELEPHAEFVGIDRVRDKRNNHVYSLEEARRLGLAKVDKKGKQMTRSY
QAFRSNIDNAVNNGVVDSHNQKISLENAIHARIIDIRNLSYHHPTHGSVDLKTAASQGLV
DVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNKTITWIDILKPVYQA
IASEGVFDPTKGHHVPVTTALNDGLINASTGNYRNSITGEDVPLSDTVDRGLIDRSTYET
ITKPFFTDYRSNRKLNLVEAVRERLIDPKNRTIQLSRQSIVPIAKAVQDGRIPMEIGEKL
RKVDKLNFAEALGKGLIDSKQNVFTDPDTGRQMSIAQAIQEGFIDTGSVQGIEGNDESNL
FNVLQSSDFDETSGRIYDKKSSLHLTFNDAVRRGVIDGDSLLHLQATGDLLTLRDALHQN
KIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTEGVKRRDAEGYKFRISEYDD
SQAQRQSVPKFRETVTVSKLTPQYNEPGLSVRMRQSTTSIGDRASKFLEDPSQLAEIQQD
FLSSLEAAQFDTDEKVIEHPHTRQRVSVREAAETGLLDVQTGEIVNPDNGRRFSIPRAVH
MKLVGGDAAKRIMEQLNMPVEEVAYATQTITSSTHRAPSPVFATASVSQPSGGATTTREF
TRTINWHGQPSELRNSQTDPLAAYTTVSSNVTESTEDAPAWARKQ
Download sequence
Identical sequences G5EFW2
ZK1151.1d NP_001021856.1.50509 ZK1151.1d

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.