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  Home > Genomes > Caenorhabditis elegans WormBase WS218 > ZK1151.1f

Domain assignment for ZK1151.1f from Caenorhabditis elegans WormBase WS218

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ZK1151.1f
Domain Number 1 Region: 13-286
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 6.96e-81
Family Calponin-homology domain, CH-domain 0.00000955
Further Details:      
 
Domain Number 2 Region: 1369-1577
Classification Level Classification E-value
Superfamily Plakin repeat 6.15e-28
Family Plakin repeat 0.0034
Further Details:      
 
Domain Number 3 Region: 2750-2918
Classification Level Classification E-value
Superfamily Plakin repeat 1.05e-27
Family Plakin repeat 0.0033
Further Details:      
 
Domain Number 4 Region: 2352-2516
Classification Level Classification E-value
Superfamily Plakin repeat 1.4e-24
Family Plakin repeat 0.0036
Further Details:      
 
Domain Number 5 Region: 2102-2165,2222-2304
Classification Level Classification E-value
Superfamily Plakin repeat 2.35e-22
Family Plakin repeat 0.0061
Further Details:      
 
Domain Number 6 Region: 1701-1843
Classification Level Classification E-value
Superfamily Plakin repeat 7.72e-22
Family Plakin repeat 0.0082
Further Details:      
 
Domain Number 7 Region: 2597-2778
Classification Level Classification E-value
Superfamily Plakin repeat 2.88e-18
Family Plakin repeat 0.0097
Further Details:      
 
Domain Number 8 Region: 1807-1944,1988-2009
Classification Level Classification E-value
Superfamily Plakin repeat 5.82e-18
Family Plakin repeat 0.004
Further Details:      
 
Domain Number 9 Region: 2894-3044
Classification Level Classification E-value
Superfamily Plakin repeat 5.89e-18
Family Plakin repeat 0.0024
Further Details:      
 
Domain Number 10 Region: 1174-1293,1326-1352
Classification Level Classification E-value
Superfamily Spectrin repeat 1.24e-17
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 11 Region: 687-816,877-901
Classification Level Classification E-value
Superfamily Spectrin repeat 8.47e-17
Family Spectrin repeat 0.0079
Further Details:      
 
Domain Number 12 Region: 1605-1718
Classification Level Classification E-value
Superfamily Plakin repeat 0.000000000000602
Family Plakin repeat 0.02
Further Details:      
 
Domain Number 13 Region: 3136-3232
Classification Level Classification E-value
Superfamily Plakin repeat 0.0000000000275
Family Plakin repeat 0.0046
Further Details:      
 
Domain Number 14 Region: 293-401
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000317
Family Spectrin repeat 0.0029
Further Details:      
 
Domain Number 15 Region: 987-1080
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000353
Family Spectrin repeat 0.0085
Further Details:      
 
Domain Number 16 Region: 538-631
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000144
Family Spectrin repeat 0.0067
Further Details:      
 
Weak hits

Sequence:  ZK1151.1f
Domain Number - Region: 810-867
Classification Level Classification E-value
Superfamily SH3-domain 0.00131
Family SH3-domain 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: ZK1151.1f   Protein: CE36462   Gene: WBGene00006876
Sequence length 3322
Comment CE36462 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ3 protein_id:CAH04742.1
Sequence 
MVGERYRSHHAVDPSDAQEKEVLDHYELNREKYNDERDNVQKKTFTKWVNKHLSKTDHKI
DDLFVDLRDGYALIALLEALTGERIQKENGYTRFHRIQNVQYCLDFLKKKNIKLVNIRPE
DIVEGNGKLTLGLIWTIILNFQVSVIRQRLLLESSQHEQMSAKHTTTNSQVSLHGSDATS
ARDALLQWARRVTAGYPRVNVNNFSSSWRDGLAFNAILHRYRSSAIDWNKISSDSVSNTE
RLNNAFAAADREFGVERLLDAEDVDTNNPDEKSIITYVSSLYNALPHEPEMSRLQKVQEE
YIEEAYEWREWVVRAIQLVDDRHLQGTASELIYELQRFREDDLPPREEQKRRLTLVYEHL
EKVMRSTELFAIPHELSAPELQRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGI
GITNEKLDLILKRIEDVEARVDTSPPAAVERTVSEIVDDLNALESPIARFFEDVEELKSM
QHPEANDFYKQVYGLHQRRTTYLDRLTNQILVRLGVRTDSLHKENQQRLENMRKTSFSRV
EECIEWVRVRMEKLTTMEFLEDLETLEHVFEQHKFDNRDIQDFRQNVDECIARQAEVSAE
DTYEYCELLRVLESEYQQLRDLSAGRMLDLDSLIAFVRAAQLELIWVSERESIEVTRNWS
DIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQGAALLNQGHPAIRVIEVYLRQMQSQW
DWLLALSKCLEEHLRDALNLKSFMEEASDAEAWIQEQSVRLENNYNRTDFSLEEGERFLR
ELDEIKEILNKYHQVLMALTERCASISPLWQRGERIPHPIKVTALCDYSDENVTIKAGDD
VYLLDNSDLIKWTIRDISGAEGQVPSVVFRIPPTDARLTALLNRLLQQFEKLKKLWDKKH
RMVRFNMVLNTMRTIQGWDLDTFNSIDPDQRDAIMKALNDDANKLLSELDPNDPLALRLR
EELRRTNEHFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRELNDAVGKPISRSPE
DLERVIHAHKRFEDALQALDSDVANVKELFRQLPNPTPTQRVNHDRLNGLWDDLWDLSRM
YVERIKVLESVLNGMVEVADIVRQHEITLNSFDDLPAALDKLRGHHSQLLEINMVLKVSK
LGAQNEHFSQQQTVIDQLNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWENVN
SQIASRLLAVESALQIQMVYRSEYETEMSWLDTVEETINRLRKPEELRPEQYQQQLDMLI
AEYTNLQEHTQAIEHVNKEGGRFIHEAKIFDAKLGQYSDGIVGIHGPGIKSEFRRTKPQP
KNGSQIVTEELELLNRRFAQLSSLILERRNTMQVLIQNWKRQKQKPDFDLKIQKPTMNIE
PVVTSAGDEWEIVDPIGDRAKISEVEDEMQTFAEETITNTQFYEMEGNLNKKTGEVLTFI
EAIRQGNLTAAGQFFDIPSASVMSLEEAAKYGLVEQDLPTVLNTTWGIHHPETRQPITLS
EAIRIGLYDSNIRQFRDIHTGEILSQSDLMSKGIANWETVLKLIKEKIMKLPPTSLANAL
EKRMVDPQTGVFKGRTTDMELQLWAAIYHGYLSIENPEHVTTIGTSLTDAIENGFINANN
AEFNDRNSNDSFKLRDAVSKRTGLINNDVVEIVQMTDDEKKRVPLGAALVRNVIGVKDGK
YTNLASRQSMSLKEAHQDGLIGKALTLEEAAQNKLVDSSGYFVDRGILGQRYTLLEAIVA
GLIDAEVRHIVDPNENDVISISEAMERGLLLPNGKIVLEKDEKEFTIPEAVHEGLLTKRV
RHSIFNIRGIRNTETSQNLSFNEAVEAGVIIPNAERVVDLQTQESFLITDDRAKNLIEVA
LHELLTTPVGIKNDRGAYELNLVRAVSSGIIDPVKGVFFNKNTKHELSTKEAYEQGFITL
RGALKVFGLLNVPPALVTPAKKLDRTRRIGRPGQEGGADGNHVTVTLQDAMRQGLVGNQR
YVHGKVDLSLEEALNRGLLDPNSQWIMPDQSKGDGPTIEEKTTETMTETGQQLAPKYFPD
KNIEESVTTVKRVRTTETTALGGPGGVSVYRSIAGGKGALEVPSRGYHIYEAERKGLIDL
TNGKISAPNVDRVLSFAEGIELGIIDATTIQVSTGGRSVSVKEALEKKIMESDGSVNGRN
IEQAVEAKTIVIDAEPLVPYNNQSKNIIQIPSGNGPIISFRQVGQPVVEESTQSWEFDTQ
QGVFVDNLTGEKLSLERALATGKVAPEDISVRDGLTGREMPLEEAEKWGIIDSKNRYYFD
KSQNKRMSYTEAAQQHLMYLTGGVPENASDAVHTTVKVQTRTAVAKKEALSSGLPLSDYS
LGKALSLGWYDQSAGTFTHPETQKQLTLKEAIMKGLFDPYDTTIVDKKAGKEISLLEAIR
EEIVDDNAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDLGSGSYTRPS
GGSSMPIHEAINRNYVDRSSVSVRDPSSGQQYSYQEAVDRRIVDADRGLIHGGGDSTSFS
QGLTSGHLVSSGSSRPTSGNQSRLVEQRLQLTPFAPNGGAGRSRDGRHELVDLGGGQQVQ
VKVVRGEGGVEKGEYTDPKSGMKFTIQMHGDPVVTETKTSVKSTSQVHSVELEPHAEFVG
IDRVRDKRNNHVYSLEEARRLGLAKVDKKGKQMTRSYQAFRSNIDNAVNNGVVDSHNQKI
SLENAIHARIIDIRNLSYHHPTHGSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDI
KRGIELRIIDAATGKVRDPRDNKTITWIDILKPVYQAIASEGVFDPTKGHHVPVTTALND
GLINASTGNYRNSITGEDVPLSDTVDRGLIDRSTYETITKPFFTDYRSNRKLNLVEAVRE
RLIDPKNRTIQLSRQSIVPIAKAVQDGRIPMEIGEKLRKVDKLNFAEALGKGLIDSKQNV
FTDPDTGRQMSIAQAIQEGFIDTGSVQGIEGNDESNLFNVLQSSDFDETSGRIYDKKSSL
HLTFNDAVRRGVIDGDSLLHLQATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKS
GRLTVIASPSEAVQAVTEGVKRRDAEGYKFRISEYDDSQAQRQSVPKFRETVTVSKLTPQ
YNEPGLSVRMRQSTTSIGDRASKFLEDPSQLAEIQQDFLSSLEAAQFDTDEKVIEHPHTR
QRVSVREAAETGLLDVQTGEIVNPDNGRRFSIPRAVHMKLVGGDAAKRIMEQLNMPVEEV
AYATQTITSSTHRAPSPVFATASVSQPSGGATTTREFTRTINWHGQPSELRNSQTDPLAA
YTTVSSNVTESTEDAPAWARKQ
Download sequence
Identical sequences G5EFK7
ZK1151.1f NP_001021858.1.50509 ZK1151.1f

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.