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Domain assignment for F43C9.4a from Caenorhabditis elegans WormBase WS218

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F43C9.4a
Domain Number 1 Region: 42-174
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.83e-16
Family Spermadhesin, CUB domain 0.0046
Further Details:      
 
Domain Number 2 Region: 181-213
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000113
Family LDL receptor-like module 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: F43C9.4a   Protein: CE28324   Gene: WBGene00003245
Sequence length 362
Comment CE28324 WBGene00003245 locus:mig-13 LDL-receptor class repeats; C1R/C1S-like repeats status:Confirmed UniProt:Q20360 protein_id:AAA81470.2
Sequence
MTKLLIALILFSICWKPYSAEPIASFFDGLDSRNECKARLDRRLTGFSGLLYSHSKYGQE
PYNTSRNCVLMLVAPIGYSIRVRALQFDVASTENARTCEKDTLHVFDHETTLDPESYAPA
RIDDITSPGPIIGQFCGHFENRILNTSSHNALTLWWHSNPNGSNSKGFKLHWGSFRVSKT
GNCVTGEFSCGNGECIPIESACDRFADCSNGEDLIHSRQMAANCQNIELDPLTTVSGVFV
LLFSATIILSLCGFIMFVCCLCKCLKSTIPIKGASSHTTTTTATDYKPDPPQFYPPSPPK
MPPPSAASSYTPRLHHHFEGPLVPSETSAFHSSNRMQNHYSVNSDINGDYTYVRNDVHRN
LL
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Identical sequences G5EF33
F43C9.4a AAD43178 F43C9.4a 6239.F43C9.4a F43C9.4a NP_001024660.1.50509

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