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Domain assignment for F54D1.4 from Caenorhabditis elegans WormBase WS218

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F54D1.4
Domain Number 1 Region: 8-93
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.36e-26
Family Nuclear receptor 0.00028
Further Details:      
 
Domain Number 2 Region: 206-381
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 0.000000199
Family Nuclear receptor ligand-binding domain 0.0085
Further Details:      
 
Weak hits

Sequence:  F54D1.4
Domain Number - Region: 407-468
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.0241
Family beta-sandwich domain of Sec23/24 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: F54D1.4   Protein: CE20866   Gene: WBGene00003606
Sequence length 536
Comment CE20866 WBGene00003606 locus:nhr-7 nuclear hormone receptor status:Confirmed UniProt:Q20765 protein_id:CAB00862.3
Sequence
MQSYTNRICAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN
ACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLADPSDWTSFLSP
SSRKQLSEIGKLAETCSTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSNSPRQLNE
QFLGIERIVQCVDYIDRFLVMLEEEHCRKFSVEDKSALISDTMIHLLLFESTSRFVAKGA
PGLEDLKLSLAQLPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTVLSNS
LNESLSLARENLSELLFKVIKHSRNKTSISAANSLSTILHFVYESRNLASRIRQSQQPFF
VRDSDPKIPFHKILTDIINPEVSDLLLTTANCRKLSTQMGSSLSSVPPVPPPSDTVPLFH
FSPPSLSPCQISAPPPPQQQYTDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMT
KSIEEFLRPNGMTTDEMNKPLEKNWADGFRLTPVFNKDIVSQFFPELSNINQHHPF
Download sequence
Identical sequences Q20765
6239.F54D1.4 F54D1.4 F54D1.4 F54D1.4.1 NP_502117.2.50509 AAD03683

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