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Domain assignment for R01H2.3 from Caenorhabditis elegans WormBase WS218

Domain architecture


Domain assignment details

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Strong hits

Sequence:  R01H2.3
Domain Number 1 Region: 120-159
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000812
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 2 Region: 215-251
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000956
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 3 Region: 455-493
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000628
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 4 Region: 295-328
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000017
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 5 Region: 370-412
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000393
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 6 Region: 253-289
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000275
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 7 Region: 420-453
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000038
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 8 Region: 189-212
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000288
Family LDL receptor-like module 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: R01H2.3   Protein: CE00802   Gene: WBGene00019811
Sequence length 548
Comment CE00802 WBGene00019811 locus:egg-2 status:Partially_confirmed UniProt:Q21629 protein_id:AAA50645.1
Sequence
MSQQAGNAQRGRFDEEPMSLGEKISHRMDQLKEIVSSSCPCAGKFPPVAIVLIVALIILG
VIIAVPLVIFLSPSAQAMSSGTRDLSSHSIRHPKVWPKTEKVQDDDLSAIQMTSLLPPNV
STCSGFGFACTGSIDMIIPSSKRCDGLKDCSDGSDEENCKECQSIYSCRAHIEEESEKKD
KTSVLPTLICLTAEKLCNGVENCPDGSDEASCRSKCSKDQFKCSGSDACLPISVKCDGVS
DCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIPDCDDGSDEHQCDCKTCSGSEKALC
EDGTCIMRSQVCDGKHDCLDGIDEENCPGSCSNERFSSKLKLLTCDDGNQYSEVEACSGL
VEACELNCPKCDPKHTFTCPAVGGIHNKCIKRSKVCDGIFDCEDGADEKKCTPVKECVVE
SSIQFTCDNKCLESSRRCDGVWDCEDKSDEKGCDKCPSRSFKCSADKKCLPFHTRCNGVA
ECSDGSDEHKCSCQECLGTHHDTYMCSESNRCLKRGEVCSPYSMCPNATYIDKAYCASLA
LKNSGLRP
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Identical sequences Q21629
NP_498537.1.50509 R01H2.3 R01H2.3 6239.R01H2.3 R01H2.3 R01H2.3

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