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Domain assignment for VC5.6 from Caenorhabditis elegans WormBase WS218

Domain architecture


Domain assignment details

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Strong hits

Sequence:  VC5.6
Domain Number 1 Region: 130-363
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.43e-32
Family Nuclear receptor ligand-binding domain 0.0041
Further Details:      
 
Domain Number 2 Region: 7-91
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.9e-24
Family Nuclear receptor 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: VC5.6   Protein: CE39522   Gene: WBGene00044699
Sequence length 386
Comment CE39522 WBGene00044699 locus:nhr-286 status:Partially_confirmed UniProt:Q2V068 protein_id:ABC48242.1
Sequence
MDITELECLVCKAPSTEPHYGADVCRACAAFFRRRVFSRFPATCDQLGSCEITGEREVRQ
CKACRMEKCLQIGMRISNVQSKRDKHDNDKLKKKDEVSEKALVPACYSKVSILPNELQCS
STYDYNNMRLKSLHLNFTEMLQIRKVRFPKRRATKTLHHAEALTIFRKDVRLVVDWINHT
FPEFSRVLEPDQQRILFRNFYMKWTVFEPAYLAVLLGKPDTYHLPTGDIVDEVGVYYTRH
LCTPTSYSLDEVSRIFSPYWADFRKTLVDPVIDAKLSIHEFLLLCAICLFDIGLDYQSDD
CIEFCQTIRQELFRELNAVCKQLCSSNSEDYCFRFSKNMLLLPSIQRGIDVLEEELQLGG
LYKLIATRTDDWYSMVDGPNFKKNEG
Download sequence
Identical sequences Q2V068
VC5.6 NP_001041174.1.50509 VC5.6 6239.VC5.6 VC5.6

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