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  Home > Genomes > Caenorhabditis elegans 76_235 > F21C10.7

Domain assignment for F21C10.7 from Caenorhabditis elegans 76_235

Domain architecture

Domain assignment details

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Strong hits

Sequence:  F21C10.7
Domain Number 1 Region: 1277-1374
Classification Level Classification E-value
Superfamily Immunoglobulin 1.13e-23
Family I set domains 0.0031
Further Details:      
 
Domain Number 2 Region: 1385-1479
Classification Level Classification E-value
Superfamily Immunoglobulin 3.68e-20
Family I set domains 0.012
Further Details:      
 
Domain Number 3 Region: 2452-2545
Classification Level Classification E-value
Superfamily Immunoglobulin 9.72e-19
Family I set domains 0.005
Further Details:      
 
Domain Number 4 Region: 1172-1264
Classification Level Classification E-value
Superfamily Immunoglobulin 1.77e-18
Family I set domains 0.0048
Further Details:      
 
Domain Number 5 Region: 2357-2448
Classification Level Classification E-value
Superfamily Immunoglobulin 1.16e-17
Family I set domains 0.007
Further Details:      
 
Domain Number 6 Region: 2178-2271
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000209
Family I set domains 0.017
Further Details:      
 
Domain Number 7 Region: 60-150
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000256
Family Spectrin repeat 0.0037
Further Details:      
 
Domain Number 8 Region: 404-526
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000352
Family Spectrin repeat 0.0063
Further Details:      
 
Weak hits

Sequence:  F21C10.7
Domain Number - Region: 905-995
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0024
Family Spectrin repeat 0.0089
Further Details:      
 
Domain Number - Region: 837-927
Classification Level Classification E-value
Superfamily Spectrin repeat 0.018
Family Spectrin repeat 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: F21C10.7   Gene: WBGene00017657   Transcript: F21C10.7
Sequence length 2588
Comment pep:known chromosome:WBcel235:V:9112790:9122180:1 gene:WBGene00017657 transcript:F21C10.7 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MAPGGAPNDANLSAVAQRGHSEEGDKSTTTLSTIAVKAGVNASIVVALLKSAGYIQLRVD
EMQPKLLSIGNSSQEARDLLNIHDDLIRRLQDKDDQVVALLSRADSLGAEKTNPNEAIVY
DEMAKSLRETWRSLNRQLLLRGYMLRETVQFYTLAESHEKLSNAKTIEIVQQINEQNSQQ
LQSSIDKLINDIIDTTASVVDLGSSVISQIRTLGQLDDNPERPQEILDASVKIESVMLRV
AADWERSEGLWQQRKSGATQQNATTTTEDELVVIEQWLTYAEKKVKALNDAGQKNVLTEG
NKHVSRLRHLAQSPSSDGGRISHLSGRIEEFLHYLKTRMNRSHRIHAFLQAAKSMVSQLN
MMVEDMKCANAAMAGELAPLAKQKASPLIHEGKDIASKEVLSYEEQRLVKQYVEDLSEKL
REIEALAKQRKESGKTTSHFSNIQSWLDGQASAFLAQKGDMGGNLNDARDFVVSHKQFAT
EIVNRDADVMSLLAKKPQMSPDEEQQLTDFMKKYEKIKDISENRIQIGSTYEQVHKFGKD
LEGSFDALQTLLENNQEYTNEKVAAQISNVFQMILETLSQEKHQAEKFISNATQIGKSDE
WLNIQRAQEAVRNMITDHENRFKYVQHKWTEWQRDKNVQTKVETVIEEIQMWQTDVLEFI
GKVDNSTVTKKEEVEEIQKRIASFKSAADMHKSTLETLKEENQNEEQISRINVLIDKTDY
VKTRLDQLSQKVELTSLLKIVEDVQIWQEEMVEIIRNMNQVVTTQSNNQEQFEQVRRKIE
DLKVEVDKKSEHLEACKTLSHNETFQTQLHKTIENQEQIRRTTIELQEKLEVSKLVRVVQ
EIQMWQEEAIEIIRMLDRTQPASIQEANELIDRVHDLQQTIEHKSARIQEVKKMSQVPEF
VHKMEEVEHVQEQLKHLTVELEEKLEQQKLVKVTEHIQMWQEEMIEIIKMFDSTPMKTVQ
ESQELQEKVKLVKEAIEVQQPKIEDVVAKARDIAVKTQISRAVEKQKVIREMAETLERKA
ISATFELSKPQQTIEETKTIELTSLEQTQITLTPEEKQELQILKKIVEEIQMWQEETIEI
IQLVDKTPKTVQESETKIKKVNEIQQTVVAQTRRLEDASRFRKDETFTKTVQETMTKQQQ
VQQLVKELHERAASQNIVVRKQEEERSRVQAPQIITQLKDDVVDEGCRYEFSARINGEPE
PTISWLKDGIDVKSNMDYRQEYVNGVATLVIEESFIEDTAEYTVKATNTGGTASSSASLI
VKSRSAMSSAILEEDKPRFVKQMQSVQVNEGETARLDCVVVGKPEPEITWFKEETAVKES
ERVHLTFSGDHCQMIIDKTVPLDTGIYTVRAKNVHGEVANFCQLRVVPKKQPPPQTPPKP
RTPIQRPPVIQPALTNTTWQEGETATLQVFSYGEPKPRVHWKFNDSPVQTSSQVQISEQE
DGWSRLTIQQISPVNAGMYTVVAENEIGEAVTGATVHVQPSLKRVVTTEHHLQEDMNEQI
GQPVQQTIITKKSQELETREKTDFPQPREPEKIVDEKRWVELVEQHFEEHLSQRSISPVP
QIREVRKTESQQRWIDTIDEIWSPMREVDITETRTVSGMDQYSSHNVHEPSPRPVGYHTT
TTTTNISHIGQSHEPVQPVMGRSTSSNETVKTMNIATIRQSPQREVYEARTTPGPTSEHV
ATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPESHISTLTRRSPSVENIAKYQQAAQP
ETHRATTTGSQPVANIAQVHNPSQPERQVFTKETPKIDRIDDILATPHEEKVTKVVKQTE
VITSDVDKNYQEQQQKQQQVTSTVTETTSGEGWVQHQHQDFVEPHKSTITVKKLDIEEQQ
NINQQRFAQPEQKHITTEKIEEDLHRESRIPVKREPQTTTTVTEITSGEGWVQNSHQDFQ
NPHLSTTTVKKLDIDEGHHLNYQTAEQLQQQVVKTRTKEENESRIRNESKIPVKREPKTT
TTVTETTSGEGWVQNVHQDLRRPEQSTVTVKRLDIEGGEHVQHDTQQLRNQQQVVTTKTE
EENDQRMKNESRIPVRREPKTTTTVTETTSGEGWVQNSHMDAANPQKSTVTVRRLGIDEE
TTKKTSARPISSEIRRQTDEESSVRHRDSFIQASDVEGFWTDGAYTDSAPTPPPQPIHRS
TAEDNMQRIGLSRTTTEPEFIKAFEREYTVEEGGRIAIECILVGNPKPAARFFFNNKQVT
EKSEFLKICHVNDTYSIIISPAKLEHAGYYKMIAENKRGVTESLTVLHVRPRSLQKYQQK
KQEETRMQQQARNAGPTEYTTVEEEFAMFEYEQRRPLKHEASKLSTPPPAKRIELEHRKD
EEHLETYDLEGKKKTGHPPHFTQTLVSTVVAQGEATTFEGIVTGWPAPNVEWTNDGRPLD
LKDIRVSNIGGRVSLNFQNCQLSHVGKYMCTAKNDSGVATSSAQLVVRPKTIAPDFIQRL
ISEEIEEGSQLKWTVRVTGDPMPKVIWMRDGFEIPDCEEVRIVDHGDGYHSLVIVKVEGA
DSGQFTCLAENIAGEARSTADLVVRPQGTAPGNYFHVTKVTQEKQASGTEPTTTSAFSIE
TPRQSEML
Download sequence
Identical sequences Q19663
F21C10.7 F21C10.7 F21C10.7 NP_505362.2.50509

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.