SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F21D12.1d.2 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F21D12.1d.2
Domain Number 1 Region: 29-116
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.34e-29
Family Nuclear receptor 0.00032
Further Details:      
 
Domain Number 2 Region: 212-441
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.05e-22
Family Nuclear receptor ligand-binding domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: F21D12.1d.2   Gene: WBGene00003620   Transcript: F21D12.1d.2
Sequence length 446
Comment pep:known chromosome:WBcel235:II:7339236:7349476:1 gene:WBGene00003620 transcript:F21D12.1d.2 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGPRSKSTMRLMSKDSSQSLVANHKATLFCAVCGDTALGKHYGVTACNGCKGFFRRSIWK
NRTYACRYQGKCGVAKEQRNACRSCRLKECIKVGMNPRAVQGDIDTASTSSASPNLVSVE
MHPYTKEVECQTEVSTISSHPTSPSTLPFVSSGSSICSVSSSCSSVSTVYSNCLAMLPPN
PSLPKYDYLLASLSRIFERVDEHAPEPLPNTYSFEHAFYNPHLICNRTKLTPTGERIATL
PEVLQDFRRIFVLFTDVLSILPEFSRLDESDRMVLAKSRFSFFYWWLTCCWTAKVGCPGV
CYANGAYHPSDKRQQAFPDVKGVTELSVETVSKPLANINITDAEMLVGSVFAIFYEYPLP
PKVSYASTHILNEARDLYTQCMITVSPYSQLEAKSASRLAEISLIFSSITNLKYLTSDNI
ELSDVLHVMEVDQLITEAFDVHRPME
Download sequence
Identical sequences H2KZU3
NP_001022103.1.50509 F21D12.1d F21D12.1d.1 F21D12.1d.2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]