SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F46F3.4c from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F46F3.4c
Domain Number 1 Region: 218-315
Classification Level Classification E-value
Superfamily Ankyrin repeat 6.53e-25
Family Ankyrin repeat 0.0000327
Further Details:      
 
Domain Number 2 Region: 350-410
Classification Level Classification E-value
Superfamily SH3-domain 7.61e-17
Family SH3-domain 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: F46F3.4c   Gene: WBGene00000146   Transcript: F46F3.4c
Sequence length 433
Comment pep:known chromosome:WBcel235:V:11683224:11685277:1 gene:WBGene00000146 transcript:F46F3.4c gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASTDPHSNHSSPSTSSQKAPTLITFSPPSFEQKINSSTMTRDSPFVERPTSFGDSLDES
RLRSGKTDLVSLRSDSLKATKRRSWAASEGTSMSEAEMIHRLLDEQRRGRSHFIPQLPTS
QEEPSAITSETYAEEVVNSESKQVATSSDSTNNLELPTEQMVLGSDTTTEEDASSCSTRS
DDGQNLEMEVAIERRTVKGILRRPNEKMNKGRIEFDPLALLLDAALEGELDLVRSSASKL
TDVSQANDEGITALHNAICAGHYEIVRFLIENDADVNAQDSDGWTPLHCAASCNNLPMVR
QLVEGGGCVLASTLSDMETPVEKCEEDEDGYDGCLKYLSAAHNSTGSINTGKVYAAYGYE
AAFEDELSFDAGDELTVIEKDKVDKNWWTCEKNNGEKGQVPRTYLALYPSLKYRKKLNFV
MFDLPLESNNNVE
Download sequence
Identical sequences E0AHD0
F46F3.4c NP_001256355.1.50509 F46F3.4c

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]