SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for T04F8.7a from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  T04F8.7a
Domain Number 1 Region: 246-306
Classification Level Classification E-value
Superfamily SH3-domain 0.00000734
Family SH3-domain 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: T04F8.7a   Gene: WBGene00011445   Transcript: T04F8.7a
Sequence length 308
Comment pep:known chromosome:WBcel235:X:11677509:11680930:-1 gene:WBGene00011445 transcript:T04F8.7a gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSRYHVPVPDYDFTVRQQKYVPARNPYIPTPDYTLKNQKQKNRPSLNNIGTEFAPQNAPE
FYELPPIYIPIEVPPPALVKEQSSRRPTNSDRQSISKLPDENYNYPEIKQHSYMEDRNEE
ERHISTKEHIKQIGVPVLPGIASAILPISSLELAAAPVATDQNRAYLRHLENHKKFDTLR
GDRGIDDCEICQIMKKQLEAEKQDSGHHSWEKPQYAGHHVANQHSSSGSGKKRGDVRDIF
RIEEQPEPEPYFRSVSARARHNYEKHRDVDVSIRAMEQVDILYMEREFALCRKSDNTIGW
IPSSVFEL
Download sequence
Identical sequences Q22166
6239.T04F8.7a NP_001123177.1.50509 T04F8.7a T04F8.7a T04F8.7a

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]