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Domain assignment for C49F5.4 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C49F5.4
Domain Number 1 Region: 106-338
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.74e-51
Family Nuclear receptor ligand-binding domain 0.003
Further Details:      
 
Domain Number 2 Region: 6-92
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.24e-21
Family Nuclear receptor 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: C49F5.4   Gene: WBGene00008208   Transcript: C49F5.4
Sequence length 343
Comment pep:known chromosome:WBcel235:X:11980209:11982045:-1 gene:WBGene00008208 transcript:C49F5.4 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNALHQKCAVCGRFTTEFNYSVLSCNSCKIFFRRLIVRTVPIKKCFRGERCFEKTPYIFK
CTSCRFQKCLYVGMTLPSYLLVLEQNKEQRLAITIDCVRNTHNKRMDSLFNFFVTEMNPN
VDDIVELNKITYTKRDEHIRMDFQTWAFHSCVTTIDFMKQFPFVNLLRSTDQMILLKESY
VKLGALISATRAYSSKKQCISFPDGTDCLPKTQWTVPKISPNLENRIRCRVIDKLRELNI
QNDEFYLLSVLLFCNPAITNLSENGQLLLTSYQKMYSSALLYYCLLTYQKSGPSRFSELL
GLFTLLGQHYDDIIHYYVLMQLNQSEVELKKLVKDGIEAAYKS
Download sequence
Identical sequences O17683
C49F5.4 6239.C49F5.4 NP_510004.1.50509 C49F5.4 C49F5.4

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