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Domain assignment for C50B6.8a from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C50B6.8a
Domain Number 1 Region: 175-190,224-423
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.57e-45
Family Nuclear receptor ligand-binding domain 0.002
Further Details:      
 
Domain Number 2 Region: 49-130
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 6.11e-24
Family Nuclear receptor 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: C50B6.8a   Gene: WBGene00008221   Transcript: C50B6.8a
Sequence length 448
Comment pep:known chromosome:WBcel235:V:13331115:13333871:-1 gene:WBGene00008221 transcript:C50B6.8a gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEPPGCSKVSSVDSIDFDFPELPSIIQKEPNRTARSESPARQRHQRPSECSICGKTANGY
HYDVPSCNGCKTFFRRLCVSEKSFICKAGGDCFNLTKRKVPLKCRACRYEKCISEGMNPN
AMLLDEKEATAENFKKLKKRVNQSNPKDPDDDSGEDIEHQIEKKQVIKDVACIENKMQKL
VDMLNYLERKVTKFRMSAYNPHWSTLPGLEAFLLLENKISLADRSGPMPGWPLKTQSSPP
KIPEFGKKPTGPAYSPDQKCWILYDLMVSIEYAKTFMFFHQLDSRDRLVLMRYVALALMN
LHISYFTVAKKYDTIIHPDGKLAPMKKGMVYAETVMSIAPLIRCEIQETEFVLLKAICLC
NPAVPDLSQHAQEILGREREQYADALFDHCLRNRKDGPSQFAELIGMVDLLERQQRMQKD
LHLLHVAPFVSKIPQKDKMLLVDDIMNF
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Identical sequences P91983
NP_001256501.1.50509 6239.C50B6.8 C50B6.8a C50B6.8a C50B6.8

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