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Domain assignment for C54F6.8 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C54F6.8
Domain Number 1 Region: 152-384
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.2e-40
Family Nuclear receptor ligand-binding domain 0.0043
Further Details:      
 
Domain Number 2 Region: 53-127
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.63e-23
Family Nuclear receptor 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: C54F6.8   Gene: WBGene00016926   Transcript: C54F6.8
Sequence length 386
Comment pep:known chromosome:WBcel235:V:7511765:7513684:1 gene:WBGene00016926 transcript:C54F6.8 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSFNIYSTSQASVQVSDVYRFIMLHFTQRRIDNIYHYMQTPATITRDSDDFEKVCTVCRR
PAFTRYYGAVSCEACKMFFRRMIIEKLSYDCKKINNCYETSKGTRFKCRSCRFKRCLQMG
MKLPPSNYTTLELKDNKIDELANLLTDLKLRDEKRCDRFMTFYTTTDPSLHDILSKNTIV
VHEQNDHTTTTIEWSFLAAYNIIEYFTSFHFIDKLNNDDKMKLFQANSFRSNIFCGGMRG
YKEKRDKMVTPGGQEILPEILVKLLNTSPQLLRRVCCQVIARLIELEITNEEFVLLNLIF
FFNTVDSMSDSAKSTLGSWQKLYTNALFQYCQLTYKHRAPSRLVDLLSLYQIVQKNTSEI
QYIGIMTQALLPDFRVKKLVSDTYRI
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Identical sequences O16443
NP_504934.2.50509 C54F6.8

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