SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F36A2.4 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F36A2.4
Domain Number 1 Region: 378-562
Classification Level Classification E-value
Superfamily Fibronectin type III 1.01e-26
Family Fibronectin type III 0.0026
Further Details:      
 
Domain Number 2 Region: 3-34,106-190
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 7.06e-24
Family Voltage-gated potassium channels 0.0042
Further Details:      
 
Domain Number 3 Region: 214-297
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 7.59e-18
Family Voltage-gated potassium channels 0.0029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: F36A2.4   Gene: WBGene00006682   Transcript: F36A2.4
Sequence length 608
Comment pep:known chromosome:WBcel235:I:8808992:8811647:-1 gene:WBGene00006682 transcript:F36A2.4 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MARFLSLHVLLIGSVVLYIILGAIVFQMLEGEHLDALKKDHMAKIEQNAKDYVDKLWSVA
KRDRDKYKNVEDLIKSVKEDTVDDFNDYVDTVFYAHRAVRHGYDEDSPTWDFANSVFFTT
TMLTSIGYGYVAPSTFGGRLFGVIYCLIGIPLTLVTVANVAKFLSETIFFLHYELWNKCL
EWKRKRKGEVEADPLQPMFGDDENEEEILDRVRLVRFPPLTVFFFVFVYGCIAAWVVRYW
ETWTYVESLYFIFISILTVGFGDIRPSPGNIWVTLAFVVVGVILTTMCMDVVGRMYLKEI
HYLGRKLKSSNPFYLLREAKARRRRAAMASLLAQLAKGMIFAHKDYNELARKKSKRKKEK
RRGSHVLPNEKFMFARLPPDPPSDCQVVSTSAYSVRLAWAPPFSPDPDLTYNIRYRLKHN
EDAKVRELRGIKGNTVEIMSVDSCSLYEFRITAHNKFGESKAVYLVQYTEPQLSPQHILA
TRLNANTIELTWEPPYKKSHEVKNYVVYFTENPNASLSEWEKIPVNGRRVVFPDLRFDWF
YMFSATAVFKDGQRSPLSRALFIKTDKIEFHKHCVGHSKTIDVMDSICEKEDNETTALLK
RDYVSFAV
Download sequence
Identical sequences P90863
NP_492381.3.50509 F36A2.4 F36A2.4 F36A2.4 6239.F36A2.4

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]