SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F41D3.1 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F41D3.1
Domain Number 1 Region: 113-321
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.87e-20
Family Nuclear receptor ligand-binding domain 0.015
Further Details:      
 
Domain Number 2 Region: 10-86
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.12e-19
Family Nuclear receptor 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: F41D3.1   Gene: WBGene00003672   Transcript: F41D3.1
Sequence length 326
Comment pep:known chromosome:WBcel235:I:12245456:12246751:1 gene:WBGene00003672 transcript:F41D3.1 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEATSQNRGPCPVCSSMDRTRRHFGIIACTACAAFFRRSFGQQYLCNAEKKCIIMHDRKF
FCRACRYSSCVKAGMRRDLVRKQKNNPRHPASLETQLPRNLPEMLSKFSKILNIHHDELL
KYYVDGVEDTIAQKQNDNVMNALQIKSIVELHKISEMENNVVLDDCLNCPGVDVLEQDDV
EVLLKYFKFVNIWVYSALASSSTCLEQFPEQTGDNSNQLFDFLHQVRSTLGSSLVRLNLN
IFEYAAFKSFCIWNLKFFGTSTAMKIVAEEHHIGITWALRKYYKESTNMTEVEIAARIGD
ITLQLLTVSDIFHDMIKLYHQVGISF
Download sequence
Identical sequences O45505
6239.F41D3.1 NP_493090.1.50509 F41D3.1 F41D3.1 F41D3.1 F41D3.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]