SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F44E7.8b from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F44E7.8b
Domain Number 1 Region: 196-431
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.66e-35
Family Nuclear receptor ligand-binding domain 0.0096
Further Details:      
 
Domain Number 2 Region: 49-132
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 8.25e-29
Family Nuclear receptor 0.00068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: F44E7.8b   Gene: WBGene00018430   Transcript: F44E7.8b
Sequence length 441
Comment pep:known chromosome:WBcel235:V:5785958:5790066:-1 gene:WBGene00018430 transcript:F44E7.8b gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEVPELIDDSSIQRKETQSPMEIGMSPPAFIEQSRMSVDQPSSSSSDSECRVCAHTAHGV
HFGVLSCRACAAFFRRSVVMDKKYSCRKASQGCRIDKSERYLCRLCRYKKCLQLGMTADN
VQWNRDMISSTDRKRQSEEDDATDVDAYSDWSPGSKKSCLDAPPLYDLSRTLNKIHKTFM
EFKIPVDDPVYQSTSTLGKMDWALRRHRKNKKMQNFRIINTIRLDQLVDMWGMEMTKQAE
FMMHSEEFRELSLEEKFSIFKLVWQVSQRFEKLTMSLEIFGKRAIEEKILITSNSTAIRM
EDVEIDLSKITDYTSLELRKMFQHVCSQMYEEVARPLMELDPSTIEISYMLCQIIWHIAG
KTLQGDILDAGEKFIGKIADDLHQYYLKEYKMSNYAGRLIKLMTVVNSLQRIHLDRLKIM
ELAKIFEVFKVKVTDPCVFQD
Download sequence
Identical sequences J7SF93
F44E7.8b NP_001263836.1.50509

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]