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Domain assignment for F54D1.4 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

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Strong hits

Sequence:  F54D1.4
Domain Number 1 Region: 8-93
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.36e-26
Family Nuclear receptor 0.00028
Further Details:      
 
Domain Number 2 Region: 206-381
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 0.000000199
Family Nuclear receptor ligand-binding domain 0.0085
Further Details:      
 
Weak hits

Sequence:  F54D1.4
Domain Number - Region: 407-468
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.0241
Family beta-sandwich domain of Sec23/24 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: F54D1.4   Gene: WBGene00003606   Transcript: F54D1.4
Sequence length 536
Comment pep:known chromosome:WBcel235:IV:11266292:11268855:-1 gene:WBGene00003606 transcript:F54D1.4 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQSYTNRICAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERN
ACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLADPSDWTSFLSP
SSRKQLSEIGKLAETCSTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSNSPRQLNE
QFLGIERIVQCVDYIDRFLVMLEEEHCRKFSVEDKSALISDTMIHLLLFESTSRFVAKGA
PGLEDLKLSLAQLPICTTHLTQKIADVFETYLRKPPSIIEYSVLKAYIVLSAESTVLSNS
LNESLSLARENLSELLFKVIKHSRNKTSISAANSLSTILHFVYESRNLASRIRQSQQPFF
VRDSDPKIPFHKILTDIINPEVSDLLLTTANCRKLSTQMGSSLSSVPPVPPPSDTVPLFH
FSPPSLSPCQISAPPPPQQQYTDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMT
KSIEEFLRPNGMTTDEMNKPLEKNWADGFRLTPVFNKDIVSQFFPELSNINQHHPF
Download sequence
Identical sequences Q20765
F54D1.4 AAD03683 F54D1.4.1 NP_502117.2.50509 F54D1.4 6239.F54D1.4

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