SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for F55D12.4a from Caenorhabditis elegans 76_235

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  F55D12.4a
Domain Number 1 Region: 137-360
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.97e-31
Family Nuclear receptor ligand-binding domain 0.00026
Further Details:      
Domain Number 2 Region: 20-98
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 9.48e-28
Family Nuclear receptor 0.00012
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: F55D12.4a   Gene: WBGene00006790   Transcript: F55D12.4a
Sequence length 370
Comment pep:known chromosome:WBcel235:I:7899037:7903334:-1 gene:WBGene00006790 transcript:F55D12.4a gene_biotype:protein_coding transcript_biotype:protein_coding
Download sequence
Identical sequences G5ECR9
F55D12.4a F55D12.4a 6239.F55D12.4a NP_001122482.2.50509 F55D12.4a

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]