SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for F57A10.5 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  F57A10.5
Domain Number 1 Region: 238-420
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.57e-47
Family Nuclear receptor ligand-binding domain 0.0027
Further Details:      
 
Domain Number 2 Region: 45-133
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.67e-24
Family Nuclear receptor 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: F57A10.5   Gene: WBGene00003650   Transcript: F57A10.5
Sequence length 443
Comment pep:known chromosome:WBcel235:V:15770302:15773226:-1 gene:WBGene00003650 transcript:F57A10.5 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIQSSSSISQDSLDLPSILSTFSADEPEDEPSPTAVKSTKPQRPTECLICGNSANGHHYD
VASCNGCKTFFRRMCVSDRSFECKAKGDCFDLTKRKVPLKCRACRHQKCISVGMNPLAME
VDEKAASSSNFKKLVKRAQDLEPDDDCQVTAVVNKMQIVKPVDSIESKMQNITDMLVYLE
TKVERFRKSAYNPHWNEFSGLEYLLESECRIGFGDRFGPMPGWPLRRDQLGPPRLPKPPS
PGKPRDSQHSQNIKQWFFYNLLTTVEYAKTFMFFHRLSSRDKLILTRHVALACTNLHISY
SSIRRNLEVIIEPDGSEPMTFNDTHYSASVMSVAPLIRCQIKNIEYLLLKAIVLCNPAVP
DLSAKSQEIISLERVKYADALFNYCLRSRSDGPPHFAQLIQIIDVLERQQRMQKDLHLLL
VAPKVAKLPKDLVMRVIEDIMDS
Download sequence
Identical sequences O17898
6239.F57A10.5 F57A10.5 NP_506930.1.50509 F57A10.5 F57A10.5 F57A10.5

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]