SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for K06B4.6.2 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  K06B4.6.2
Domain Number 1 Region: 103-335
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.23e-41
Family Nuclear receptor ligand-binding domain 0.0027
Further Details:      
 
Domain Number 2 Region: 2-71
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.43e-23
Family Nuclear receptor 0.00081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: K06B4.6.2   Gene: WBGene00010601   Transcript: K06B4.6.2
Sequence length 340
Comment pep:known chromosome:WBcel235:V:15690204:15691606:1 gene:WBGene00010601 transcript:K06B4.6.2 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNCLVCSARAFNRNYGVMSCFACKMFFRRTVFKNMLFNCKYFKNCTIHYKTHPKCRACRF
QKCLNIGMKAASKNDRIVSIGNYEDYNFDKLLNDLIVKNDKNYSNFIDFYSLEDPSLKDI
IEDRSIMKLVRRTPETLNDVDQWSNMLAYSRISYFLDFNFIRELDSSDKNTLFKYNVSRA
GCLALAMCAYSENKPKLTFPNDVDIFPSEMYNLCGSSTAVLNQVSGQVIAKFIELEIRQE
EYLLLLLVMFCNASITNNFSHKTKLILSSHQQVYCSALFRYCQLKYSKSAPTRFTELLSV
FGIVNKSVNNMSFLSMMVQCYNPKFNFKRLMQDIFSHTLS
Download sequence
Identical sequences O17930
NP_506902.2.50509 K06B4.6.1 K06B4.6 6239.K06B4.6.2 K06B4.6.1 K06B4.6.2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]