SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for K10C3.6b.1 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  K10C3.6b.1
Domain Number 1 Region: 188-406
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 5.11e-49
Family Nuclear receptor ligand-binding domain 0.0000268
Further Details:      
 
Domain Number 2 Region: 8-90
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.06e-31
Family Nuclear receptor 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: K10C3.6b.1   Gene: WBGene00003639   Transcript: K10C3.6b.1
Sequence length 476
Comment pep:known chromosome:WBcel235:I:9871228:9874676:1 gene:WBGene00003639 transcript:K10C3.6b.1 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDLVDPLAEPCAVCGDKSTGTHYGVISCNGCKGFFRRTVLRDQKFTCRFNKRCVIDKNFR
CACRYCRFQKCVQVGMKREAIQFERDPVGSPTSGASLNGTPFKKDRSPGYENGNSNGVGS
NGMGQENMRTVPQSSSVIDALMEMEARVNQEMCNRYRRSQIFANGSGGSNGNDTDIQQGS
DSGASAFAPPNRPCTTEDLNEISRTTLLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHL
ILMPAFRSPDTTRVCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMRE
QEFVCLKALAFLHPEAKGLSNSSQIMIRDARNRVLKALYAFILDQMPDDAPTRYGNILLL
APALKALTQLLIENMTLTKFFGLAEVDSLLSEFILDDINDHSTAPVSLQQHLSSPTTLPT
NGVSPLNPAGSVGSVSSVSGITPTGMLSATLAAPLAIHPLQSQDSILNSEQNNHML
Download sequence
Identical sequences K10C3.6b NP_492613.1.50509 K10C3.6b.1 K10C3.6b.2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]