SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for K11E4.5a from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  K11E4.5a
Domain Number 1 Region: 221-449
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.07e-29
Family Nuclear receptor ligand-binding domain 0.002
Further Details:      
 
Domain Number 2 Region: 8-90
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 7.75e-28
Family Nuclear receptor 0.00089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: K11E4.5a   Gene: WBGene00003661   Transcript: K11E4.5a
Sequence length 578
Comment pep:known chromosome:WBcel235:X:13747315:13751777:1 gene:WBGene00003661 transcript:K11E4.5a gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKDEYNSQECMVCSAPADGLHYGAISCRSCNAFFRRTVVEKAEYRCKHTNTCLIDPDGRC
ACRSCRFTKCIEAGMKIGAVQPRRDPTGSQKERRKRAGGVGEMMSMNNSPLERNGNSFSS
DGPTSNSFIVDAIRTDYGFATPRRISTDYSNSPDRYRKYVKIELDDEPIPSTSSAPEKQS
CQSSPNDDEQQEFNHLVYAFGEHQRMMQLSFSTFEQFLDEHSNGPKLRRMDPLDVSKLSA
VELTGLLYWIEKQQPYGELPVEDRSSLLKRYSVRKLSLDHFYSASKHPEYCARGEFVMNN
FTFVPADRTGFELPDDDPHQIQAKREHCRTFAPTFNRFWKNVIRPFVLMKVNDAEVVFLH
IMLLWSVTNNEHVTEDTRKVMKQRRDWAMNRLFDWYNEHGTSDPPLRFGQMILLLGEIEL
ICDMHCQDFQVAKLFEFCDMSKFWYETLCYAPCNTNVLKFDPNLLENLKRFTAISVMENN
GGLRPFVKTEIKQDPVLYSSPEVIAPESCYNDYQTVDIPVDCNPHTEPVSMDPNLANIDP
AVLVFNAHMLPSVMAPLPDDADYHRPQLYHTQSEEVMT
Download sequence
Identical sequences K11E4.5a K11E4.5a NP_001024787.1.50509

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]