SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for R11G11.2a from Caenorhabditis elegans 76_235

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  R11G11.2a
Domain Number 1 Region: 161-388
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.03e-34
Family Nuclear receptor ligand-binding domain 0.012
Further Details:      
Domain Number 2 Region: 6-89
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.32e-22
Family Nuclear receptor 0.0027
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: R11G11.2a   Gene: WBGene00003648   Transcript: R11G11.2a
Sequence length 393
Comment pep:known chromosome:WBcel235:V:532363:534047:1 gene:WBGene00003648 transcript:R11G11.2a gene_biotype:protein_coding transcript_biotype:protein_coding
Download sequence
Identical sequences O16960
R11G11.2a 6239.R11G11.2a NP_503236.1.50509 R11G11.2a R11G11.2a

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]