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Domain assignment for R17.3 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

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Strong hits

Sequence:  R17.3
Domain Number 1 Region: 243-294
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000785
Family TSP-1 type 1 repeat 0.0031
Further Details:      
 
Domain Number 2 Region: 214-244
Classification Level Classification E-value
Superfamily Somatomedin B domain 0.00000418
Family Somatomedin B domain 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: R17.3   Gene: WBGene00011269   Transcript: R17.3
Sequence length 440
Comment pep:known chromosome:WBcel235:III:10835014:10839176:1 gene:WBGene00011269 transcript:R17.3 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRHFLFVSLVFSIPYTCHAGCYQRRLCCAGRNNTCKGVDDGIAHLPTVSTIHNEEAQTFH
QRPTVRTEKEYYTPHYESSGDGYDLIFPDVFDEESDERIGKLVLPDIIEMDGSGADKVYE
RYGLGSGDGEPEDVETQEIPLTTPAPRLKTLIFGLKRDQRTPPEEITRYSEKPRHLLIRY
SLLSKFMPLKVTSTPLLYEENRVQPANNLYYLESSISECYCDEHCVTLGDCCSDYTFVCP
PRDCVLTDWDSWTQCTADNGTCGIGTQKRLRHVIQHAERGGAACEPLKEMRTCFVECRPK
KSALDDITTVALILDYRHNKTRSKIRRNNIYWDLPNVAEKMKKATYYCVHYTIDWVNRNC
VSRLLNKGLSEGSVMCAECQPEATYHRNNGRCASDLEDGDQGFWKLIGPQSCNGIWTRIN
RTENCQCQIEYPKDHPFLLV
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Identical sequences O18003
R17.3 R17.3 R17.3 R17.3 NP_499387.1.50509 6239.R17.3

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