SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for T26E4.8 from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  T26E4.8
Domain Number 1 Region: 66-312
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.97e-35
Family Nuclear receptor ligand-binding domain 0.005
Further Details:      
 
Domain Number 2 Region: 1-65
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000000703
Family Nuclear receptor 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: T26E4.8   Gene: WBGene00012050   Transcript: T26E4.8
Sequence length 315
Comment pep:known chromosome:WBcel235:V:15796387:15797534:1 gene:WBGene00012050 transcript:T26E4.8 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFFRRQAIRKCALRPCSGGEACYRDTPLILGCQFCRFQKCIEVGMNIKALLQKTSLESLI
NFISDVDFERCITFLNFYPKQAGYTIWNVVENFPIEYIHRSQPLNYRCWLFLTAVSTIDF
MKKFPFVFLSNSHDQTIILRKKFVKVASFCEAFRVYLFRDKQLAFPDGSSILIEGLDSEL
GDRIKYRLVVTFFELHITNEEFLLLLVLLFSNPGCFLEAGIQSLLNFHLPFTIESLSQTG
SRLLSAYQNYYSSSLLEYCMLTYLKNGPTRFAELLDVFQVVGQHYEDLNRYFVLLQLTNP
EFQLDEIVKEGFNLL
Download sequence
Identical sequences T26E4.8 T26E4.8 T26E4.8 6239.T26E4.8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]