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Domain assignment for Y104H12A.1a from Caenorhabditis elegans 76_235

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Y104H12A.1a
Domain Number 1 Region: 192-275
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.43e-27
Family Nuclear receptor 0.00011
Further Details:      
 
Domain Number 2 Region: 379-546,578-617
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.22e-20
Family Nuclear receptor ligand-binding domain 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: Y104H12A.1a   Gene: WBGene00022423   Transcript: Y104H12A.1a
Sequence length 657
Comment pep:known chromosome:WBcel235:IV:1386163:1399353:1 gene:WBGene00022423 transcript:Y104H12A.1a gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MYTLPKCSDHPHRPLILENSTSSTGLIFAESQASASHQTWINMTLGDPCSVEQPPPPPID
FSRSLIAPTAIKQESHLIPSTPGTPTAFQPPQHANTPIPGIQPNLFNPAIMAAQLNVFSN
PQLMAMMQATRNPLLGHPSVVGPPMMPNIIQQLNALRNVQLSNANTMANLQNMSSSPKHT
NGSSERSENCGELCVVCGDKASGRHYGAVSCEGCKGFFKRSIRKRIGYVCRSQKDCPVTK
FHRNRCQYCRLRKCLSMGMRSESVQAERRPVNNSSMLCNNDNNQQNTTPEHLSPNLLLSL
VKLEHETKLGGLEALIKPGSPVMLQNTQDYMDVKRESIGEDEMTVIGLVPPSASPTSSGV
GSSSSISDDSGPIYTSERARFEISVPLNTQNPRNHQYISEITTRLLFLTVHFVKDSRVSL
RTSTMEGLLKSKWCDLYILALMQTADKIKLGQLLDNLTNQMAMGMECGQYSAEKFEKISE
QMQRLLQLSQLFASRELTAVEYAYLKMISFTAQDLPSSMASPETRSVNQMASQELFEYVS
SSKSTQNHMSNEHINVDDSTSEDNDTHVTSQQSSVNIAAERFSRILQLLPCLRWFDPATI
VEIFFSGLIGPMSIETIIPFVLQMNLMSFFDQKMELGSGGASDTLSTSSLSEMMNNQ
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Identical sequences Q3V5L2
6239.Y104H12A.1 Y104H12A.1 Y104H12A.1a NP_500073.2.50509 Y104H12A.1

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