SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for VC5.6 from Caenorhabditis elegans 69_215

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  VC5.6
Domain Number 1 Region: 130-363
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.43e-32
Family Nuclear receptor ligand-binding domain 0.0041
Further Details:      
Domain Number 2 Region: 7-91
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.9e-24
Family Nuclear receptor 0.0021
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: VC5.6   Gene: VC5.6   Transcript: VC5.6
Sequence length 386
Comment pep:known chromosome:WBcel215:V:7089551:7091522:-1 gene:VC5.6 transcript:VC5.6 gene_biotype:protein_coding transcript_biotype:protein_coding
Download sequence
Identical sequences Q2V068
6239.VC5.6 VC5.6 VC5.6 NP_001041174.1.50509 VC5.6

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]