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Domain assignment for gi|16330976|ref|NP_441704.1| from Synechocystis sp. PCC 6803

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|16330976|ref|NP_441704.1|
Domain Number 1 Region: 2-148
Classification Level Classification E-value
Superfamily N-terminal domain of MutM-like DNA repair proteins 2.75e-37
Family N-terminal domain of MutM-like DNA repair proteins 0.00057
Further Details:      
 
Domain Number 2 Region: 143-232
Classification Level Classification E-value
Superfamily S13-like H2TH domain 1.77e-29
Family Middle domain of MutM-like DNA repair proteins 0.00049
Further Details:      
 
Domain Number 3 Region: 232-283
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 8.96e-18
Family C-terminal, Zn-finger domain of MutM-like DNA repair proteins 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|16330976|ref|NP_441704.1|
Sequence length 287
Comment formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803]
Sequence
MPELPEVETVCRGLNRLTLEQTIGGGEVLLDRSLAYPVSVEDFQKQITGCRLVGWQRRGK
YLLGELRSNQAPGPAGWLGCHLRMTGQLLWTERDQQRPRHTRVVLHFEGGWELRFVDTRT
FGKVWLLPGDRPWAEVMTGLGQLGPEPFGADFTAEYLYEKLKSSRRPLKNALLDQRLVAG
LGNIYADEVLFFCGFHPTMASNQVSLQDCELIHQQIQATLTAAIEAGGTSFSDYRQVTGI
NGNYGGMAQVYGREGEPCRHCGTVIAKIKLGGRSAHFCPQCQPKLER
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Identical sequences P74290
gi|383491771|ref|YP_005409447.1| gi|383322718|ref|YP_005383571.1| gi|16330976|ref|NP_441704.1| gi|383325887|ref|YP_005386740.1| WP_010873004.1.11876 WP_010873004.1.1889 WP_010873004.1.18904 WP_010873004.1.33690 WP_010873004.1.35395 WP_010873004.1.47586 WP_010873004.1.99424 gi|16330976|ref|NP_441704.1| 1148.slr1689

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