SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|16332195|ref|NP_442923.1| from Synechocystis sp. PCC 6803

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|16332195|ref|NP_442923.1|
Domain Number 1 Region: 1-118
Classification Level Classification E-value
Superfamily CheY-like 8.54e-39
Family CheY-related 0.00021
Further Details:      
 
Domain Number 2 Region: 126-221
Classification Level Classification E-value
Superfamily C-terminal effector domain of the bipartite response regulators 1.34e-27
Family PhoB-like 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|16332195|ref|NP_442923.1|
Sequence length 234
Comment OmpR subfamily protein [Synechocystis sp. PCC 6803]
Sequence
MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI
TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC
ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWK
LESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTEKSLCQGKN
Download sequence
Identical sequences A2IBN8 L8AN34 P74626
gi|16332195|ref|NP_442923.1| 1148.slr1584 gi|383327105|ref|YP_005387959.1| gi|16332195|ref|NP_442923.1| gi|383492989|ref|YP_005410666.1| gi|383323936|ref|YP_005384790.1| WP_010874216.1.11876 WP_010874216.1.1889 WP_010874216.1.18904 WP_010874216.1.33690 WP_010874216.1.35395 WP_010874216.1.47586 WP_010874216.1.99424

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]