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Domain assignment for CBG12347b from Caenorhabditis briggsae 2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CBG12347b
Domain Number 1 Region: 1097-1262
Classification Level Classification E-value
Superfamily C-type lectin-like 1.73e-53
Family Endostatin 0.0000156
Further Details:      
 
Domain Number 2 Region: 15-210
Classification Level Classification E-value
Superfamily Fibronectin type III 2.03e-24
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 3 Region: 403-573
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.0000000000332
Family Laminin G-like module 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CBG12347b   Protein: CBP37644   Gene: WBGene00033309
Sequence length 1293
Comment CBP37644 WBGene00033309 locus:Cbr-cle-1 status:Partially_confirmed
Sequence
MYFSGQNLILRKDRVPNAPQNVRVKTQSTSATLWWDAPPDPTVLIRGYTVEYGEGSISQR
ILIEGPDSTSFTVTRLAPNTNYVFAVSAYNEAEGEDGTKVMVAAKTRPAEGLQTEKLWPP
TSVRARIEEKSLGGSAIVSWDDPNPENAADNSIDATQRQYVINYGIYESDTQQKVRSNAK
AVRLTGLIPGKEYEVAVKVVAGDGSESPWSIRDLFLVPESIISICLLQIQTNSFSAKKVS
KFDWFCRLNDTEMCSIVSSPHWKLCTAKHDTYTQRDAGACPRVQYPSSPAHLTTPPISLP
DAQHLCFYFRFALLNFHPGQMKVEIHPDGDTSNRQIVWKTRMANVRTHVVQNVYIPFSQQ
IRPFKVSVSLKWDGQPMPRVIVHEMDALSGGCSERSTDTETEVDLLAPVKASLNADARVF
RAKGIESLPAIGLQRGVEIAVPYRLYLPRNFFKQFSLLATIKPMDKRGGYLFAAVNAYDS
AVDIGLLIEPAGTKQTNISLIVRSVAIVSFLVEDFSQQWTQFALEVIDQTVTFYFKCRRF
ASRQVTSLPDFSFDEAEKLYIASAGPIIDNGFEMRRLLALFVVLLLIFVFVHGGSEELDN
EDFPLLSSEQQASSPEERKEFSTSPEDSSIPGTVFHVHIPLADARVRQARASSEEREIVT
ENVMLPVEIVEVIDDGTGFEDDGKGAIQELKLIDDASQGSRQCDEQWWRRRKLEKERDQT
RKNVEGSGTPEGLKKDQESSELQKISELPPTPAPPPPYPTPHLAAPQDLFLSDDSLVVPF
IGGYGSPATRDLRSYEQQAATTPFQGVPSPQGQCTQVCRGETGPQGPPGKDGIPGSHGAP
GHQGERGSDGSPGVHGSRGEQGPQGPPGMPGLAGPPGPPGTGSVTGSGGVAQPGPPGPPG
LPGAPGRDGAAGVEGQRGPHGPPGPKGDDGVSMESLTDGDIERIARRVAAIQKESQEPMR
GDLPEYNPRVHSYTTKGEKGERGAPGAPGAPAYGAITTGTAVNVHATTVELFASARATSV
GQLAFATSSQQLFIRVTNGWKEIQLTHFHPFLETRQSTQNSRQNDASQPARPVVSPWHPR
ANLEEPQKDSGPHNKDRVIHMIALSQPFAGNIHGLRGADLQCYREARASGYTTTFRAMLS
SNVQDLVKIVHSVDHDTPVVNIAGHHLFASWRSFVNGAKINQHARLFSFDRHDVLNDSRW
PDKRVWHGSKEGGIRADQYCDGWRRSDASITSLAGQIYSNTTIFQSSGPSTCENKLVILC
VEVIAKIIYYSNMSKYHSDRILRLNRITTDFKX
Download sequence
Identical sequences CBG12347b

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