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Domain assignment for CBG12347c from Caenorhabditis briggsae 2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CBG12347c
Domain Number 1 Region: 1074-1239
Classification Level Classification E-value
Superfamily C-type lectin-like 1.7e-53
Family Endostatin 0.0000156
Further Details:      
 
Domain Number 2 Region: 15-210
Classification Level Classification E-value
Superfamily Fibronectin type III 1.95e-24
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 3 Region: 403-573
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.0000000000316
Family Laminin G-like module 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CBG12347c   Protein: CBP37635   Gene: WBGene00033309
Sequence length 1270
Comment CBP37635 WBGene00033309 locus:Cbr-cle-1 status:Partially_confirmed
Sequence
MYFSGQNLILRKDRVPNAPQNVRVKTQSTSATLWWDAPPDPTVLIRGYTVEYGEGSISQR
ILIEGPDSTSFTVTRLAPNTNYVFAVSAYNEAEGEDGTKVMVAAKTRPAEGLQTEKLWPP
TSVRARIEEKSLGGSAIVSWDDPNPENAADNSIDATQRQYVINYGIYESDTQQKVRSNAK
AVRLTGLIPGKEYEVAVKVVAGDGSESPWSIRDLFLVPESIISICLLQIQTNSFSAKKVS
KFDWFCRLNDTEMCSIVSSPHWKLCTAKHDTYTQRDAGACPRVQYPSSPAHLTTPPISLP
DAQHLCFYFRFALLNFHPGQMKVEIHPDGDTSNRQIVWKTRMANVRTHVVQNVYIPFSQQ
IRPFKVSVSLKWDGQPMPRVIVHEMDALSGGCSERSTDTETEVDLLAPVKASLNADARVF
RAKGIESLPAIGLQRGVEIAVPYRLYLPRNFFKQFSLLATIKPMDKRGGYLFAAVNAYDS
AVDIGLLIEPAGTKQTNISLIVRSVAIVSFLVEDFSQQWTQFALEVIDQTVTFYFKCRRF
ASRQVTSLPDFSFDEAEKLYIASAGPIIDNGFEMRRLLALFVVLLLIFVFVHGGSEELDN
EDFPLLSSEQQASSPEERKEFSTSPEDSSIPGTVFHVHIPLADARVRQARASSEEREIVT
ENVMLPVEIVEVIDDGTGFEDDGKGAIQELKLIDDASQGSRQCDEQWWRRRKLEKERDQT
RKNVEGSGTPEGLKKDQESSELQKISELPPTPAPPPPYPTPHLAAPQDLRSYEQQAATTP
FQGVPSPQGQCTQVCRGETGPQGPPGKDGIPGSHGAPGHQGERGSDGSPGVHGSRGEQGP
QGPPGMPGLAGPPGPPGTGSVTGSGGVAQPGPPGPPGLPGAPGRDGAAGVEGQRGPHGPP
GPKGDDGVSMESLTDGDIERIARRVAAIQKESQEPMRGDLPEYNPRVHSYTTKGEKGERG
APGAPGAPAYGAITTGTAVNVHATTVELFASARATSVGQLAFATSSQQLFIRVTNGWKEI
QLTHFHPFLETRQSTQNSRQNDASQPARPVVSPWHPRANLEEPQKDSGPHNKDRVIHMIA
LSQPFAGNIHGLRGADLQCYREARASGYTTTFRAMLSSNVQDLVKIVHSVDHDTPVVNIA
GHHLFASWRSFVNGAKINQHARLFSFDRHDVLNDSRWPDKRVWHGSKEGGIRADQYCDGW
RRSDASITSLAGQIYSNTTIFQSSGPSTCENKLVILCVEVIAKIIYYSNMSKYHSDRILR
LNRITTDFKX
Download sequence
Identical sequences CBG12347c

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