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Domain assignment for CBG20149 from Caenorhabditis briggsae 2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CBG20149
Domain Number 1 Region: 151-292,398-610
Classification Level Classification E-value
Superfamily RNI-like 4.63e-44
Family 28-residue LRR 0.025
Further Details:      
 
Domain Number 2 Region: 656-897
Classification Level Classification E-value
Superfamily PP2C-like 5.23e-21
Family PP2C-like 0.0013
Further Details:      
 
Domain Number 3 Region: 266-386
Classification Level Classification E-value
Superfamily L domain-like 0.000000397
Family Internalin LRR domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CBG20149   Protein: CBP25960   Gene: WBGene00039205
Sequence length 1055
Comment CBP25960 WBGene00039205 status:Predicted UniProt:A8XXB3
Sequence
MSDENENESSQALEDILSYTDSPAFRHIFSFFLGRPRIRAKSTLTSDILSEEVVIRKGKL
IHSWQNARAVFYNSNIRLQTKNNQDEALQIRNMKVDIYESKKGRSLRLKDDDNCFLIIFQ
RPNILEAWFSRAQQVEKSNHVDASDEQLTLIPEQILNNEARIQILNLRRNSLISRPPTEK
VKFKSSLAPLGYIDDLYRVHSLQVIDLSANQILSFPIQLTLLSHLRQLNLSSNYISSVPN
ECSNMRRLQYLNLSNNQLDSLPDSISELQNLQSLDISFNQFSQISPCLFHLSLEMWRLAG
NNIEKIQRVGDLKIQKIDLRRNVLGTSFRLDIENITHLDLRDNSMVSTVHLTNLRFLKVI
HCERLQLTSLHLSGESLTHVYADHNLLDSLVVMPLPQNLQTLSLSFNHFQNLPDWISDCP
NLTFLRANNNGLVALPERIFFSPSLRSIFAFVNEIENLPDFGEENCLETLILYKNKISHL
PKHFFSVLPRLRQLNISSNFIELLPYFDGSSFCRLQILRAANNYLTENSVPVIVNMKHLK
TIDLSHNRLNSFDDSALSSLELLEDLNLSSNRLTRLADCLALLPCLQVLRAHSNQLVHVP
ELQGAGQLHTIDLSSNNISLGTLQFKAPPNLRHFDVTCNSGDFDTENFPENSDMHTKMNT
INISEEPHNLFGFQIGVSGSRGMKNKQCIRQVRVENTFGFIDGGSNSYMASSICRFLTSY
LRDNPSSDIRSILLRCHCELGEEGERLGASVMIIRLHEKHIELASTGTMSAAVARHQKLK
TIVNGKYEIDDDEYSRIREAHGFVDEENRINGVIGTSRQIGHFSTFPVVLPTHSYKNIEL
SERIEGLIVANSTVWNMLSMEDLSMVFQNNRSPIVVAKKIQDQLQSYDYGGNSNILVLRR
IKPQMTFNGFSTISSSSMTPEIRETFSRPKIDEQLVLAVPAMILPEYHPSPPGPSAVPQS
TVVPPPPPPPIPATRHRTPSPPPPPLPLSTPPPVSSEHEEINIHQSATSSSYTLSIDRFY
SSSSTVSSRKQFNETRDLLSKSLKLSPPNTVTFNI
Download sequence
Identical sequences A8XXB3
6238.CBG20149 CBG20149

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