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Domain assignment for MDP0000182297|PACid:22647987 from Malus domestica v196

Domain architecture


Domain assignment details

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Strong hits

Sequence:  MDP0000182297|PACid:22647987
Domain Number 1 Region: 115-198
Classification Level Classification E-value
Superfamily BRCT domain 1.6e-19
Family DNA topoisomerase II binding protein 1, TopBP1 0.068
Further Details:      
 
Domain Number 2 Region: 923-1007
Classification Level Classification E-value
Superfamily BRCT domain 0.0000000000000843
Family BRCT domain 0.014
Further Details:      
 
Domain Number 3 Region: 1170-1232
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000000598
Family PHD domain 0.0062
Further Details:      
 
Domain Number 4 Region: 8-90
Classification Level Classification E-value
Superfamily BRCT domain 0.000000000538
Family DNA topoisomerase II binding protein 1, TopBP1 0.057
Further Details:      
 
Weak hits

Sequence:  MDP0000182297|PACid:22647987
Domain Number - Region: 1033-1113
Classification Level Classification E-value
Superfamily BRCT domain 0.0245
Family DNA topoisomerase II binding protein 1, TopBP1 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) MDP0000182297|PACid:22647987
Sequence length 1245
Sequence
MTEGSSPAKTFVGVRFLLLGFDPXDXHQVRSKLVDCGGEDXAHYSPNCTHVIVDKIVYDD
PVCVAARNDAKTLVTALWVHHSFDVGLPIDPTSPFAQIIYRPLRDLNGIPDAKRLIVCLT
GYQRQDRDDIMTMVGLMGAQFSKPLVANKVTHLVCYKFEGEKYELAKKIPKMKLVNHRWL
EDCLRDWQLLPEXNYNISGYELEMMEAEARDSEDEAENTFGKQSGVRSMYKSPHNIKAGS
PATSRLPKSEGEVRKVPLIFDNAIGNLSIPRNENKLDQTSSFSNSYVSKGLGCQDARELR
DSSGCDLNDQHHRTPDPKVRDDFISNCGSAGRASHSAGKLSYSRQTLXMPTVPTYTGDKS
SGCSVSSKVPICKSSATLKDQANDKFDPNCVEVPLKGIHLQNGEESSGILPRKRVMDLSY
ASSKSQKMSPGAKSGSMHSPSPSNKSPKGKPTSLIDGSCRTTSHYIVTNDDHSPDKTSNL
NAAGNSMAGVSPAKLSNLIQKPLACDLPFSATVISNMGKDENANMKSPLTTIRRLRKPSL
SNKPGIVDCAEEKSTAAVSKAVELQNQPQDVEGSSASNKKSVNNSSNDPADLNMLKEGNN
DLVTKHLEQKVKSKKTLGSRPRLVSANQKGSVHLYKDASLNDTAVLYNAGDSQKSPDPTK
LDVLCPDVNVEAPNELEGKDVDMSADVDEKNIESMDDETEAPEEESEHKLENVVHEAKDI
VVQATSKCDKKSEQEQHLQDHSDACTPRDAMASLGIEGNEREKSVSDNISLLVEPAADGD
AVKGKKNQGKKHALGKTKLKTVHPVADVMKPKKVVSEENTRNDXTRVTEKKKEKRLAGLV
GKAKCRSAPQNKLENSAKMKENKPIVGGDQTVSKAKQQAEKSIAKSGXTPLKIIQTSAER
SDNPSIPEGKAXSKVKIEPVRFILSGHRFQRKEFQKVIKRLKGRCCRDSHHWSYQATHFI
SPDRVGRTEKFFAAAASGRWILKSDYLEASDKEGRFLEEEPYEWYKNGLSEDGTINLEAP
RKWRLLRKRTGHGAFHGMRVIIYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLKSGV
DYAIVSPGMPRADMWVQELLNHEIPCVVADYLVEYVCKPGYPLDRHVLYNTNAWAEKSFE
RVQSRAEEVVEEAFTGEDGEDGDDASCGGGSDIPCVVCGSGERGEVMLICGNESGSVGCG
IGTHIECCNPPLESVPEDDWFCPDCSWSKNSTKSSKKRKKGRSSK
Download sequence
Identical sequences MDP0000182297 MDP0000182297|PACid:22647987

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