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Domain assignment for jgi|Dappu1|104634|fgenesh1_pg.C_scaffold_31000097 from Daphnia pulex

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Dappu1|104634|fgenesh1_pg.C_scaffold_31000097
Domain Number 1 Region: 220-302
Classification Level Classification E-value
Superfamily HMG-box 1.31e-18
Family HMG-box 0.00087
Further Details:      
 
Domain Number 2 Region: 127-206
Classification Level Classification E-value
Superfamily HMG-box 0.00000000000017
Family HMG-box 0.0015
Further Details:      
 
Domain Number 3 Region: 356-417
Classification Level Classification E-value
Superfamily HMG-box 0.000000275
Family HMG-box 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|104634|fgenesh1_pg.C_scaffold_31000097
Sequence length 468
Sequence
MADCSVVGLQESCYPLCARGSKEPLRPIDESEDEETWSKKENFELIKRIRKALKKDDVIN
YQVRVSKLNWNAIQFKDYSATQCKNRWFYIEGCLRQYRLLAEVLEDAEKWVDDPSWYEFH
QGVKRPSPPKPPTPFKLFSDEMLPKRLNQGMSSTAARERTRDAYKQLSDKQKLKWIYKAQ
EKEPEFNEEMDEYQRQHPDVELPAKKLSLLTKDEISCSRNEGRPKKPPTSGYSLFSKTLL
SSNCLSKFETTERMKVIARRWKELSEEEQTKYNDRTAQLKTAYKMKYASYMETLTCQQRN
AELPTLKSPERSIHPKSRRSAANADSKSAKSPSKIKPSSKGKALKSLTEKVASKTLPKPP
VSPAAYYVMSHHSKLVNLSAAEIDVLWERVSKKQKEKFTKQLKKKNDEYVLELKKFRTLN
LAKLKSSQKSGNAQDERDVFKENSDEQSTDQTSSSYSCDLDTSSSDED
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Identical sequences E9GMV1
jgi|Dappu1|104634|fgenesh1_pg.C_scaffold_31000097

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