SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Dappu1|111544|fgenesh1_pg.C_scaffold_86000091 from Daphnia pulex

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Dappu1|111544|fgenesh1_pg.C_scaffold_86000091
Domain Number 1 Region: 87-199
Classification Level Classification E-value
Superfamily C-type lectin-like 0.000000682
Family C-type lectin domain 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|111544|fgenesh1_pg.C_scaffold_86000091
Sequence length 477
Sequence
MADGNDTPRLRKDLVYQDGVYHRSNPRNPPEWNRSIAVGVLCSVLILIALIVLGVYFFNP
STVKKIISGQSILAPTCTEEPAMGYNNFCAQDTFISPDHKYVFHPGRLSFTKAQRVCAAL
PGGGGNLTTVLSEQQEKRFDRRIENLHQILFVNDDTLLSGFRKQIWTGGYIDLELDGINR
MRWIDEAGLSEWHQNFCEPKQAMQILKVSLDELRKYGAITNSLVYVVKDYRPTKNGCWQL
YSSLFYETEHLEFSFVCQVAAAGLPFNLKHNFLGDFLPDEKNHLFANEYAAFSGRGSYLM
ARETCQHLASGAQMLAPKTSALDTEINNGVERHSNEIFGEDNGDPQRRKLIWTGGYFNLT
SKDPTKLRWADDPSTLLDIAEPSTWSFFGSSSANQVKEYENFCGTPEYYQGLIKKALNED
RGAEKGCVRERLFLIVKDFREDQSGQGCWEVYDSDYLSRHDYKLFLVCKLPYPVEKT
Download sequence
Identical sequences E9H9H7
jgi|Dappu1|111544|fgenesh1_pg.C_scaffold_86000091

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]