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Domain assignment for jgi|Dappu1|229018|estExt_fgenesh1_pg.C_1400028 from Daphnia pulex

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  jgi|Dappu1|229018|estExt_fgenesh1_pg.C_1400028
Domain Number - Region: 250-291
Classification Level Classification E-value
Superfamily HMG-box 0.00523
Family HMG-box 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|229018|estExt_fgenesh1_pg.C_1400028
Sequence length 1319
Sequence
MSENRAILEKTFALTSQQQEGTIALLDVTVEGQILVEGNLTELEEAPNVVGSSAQTEEEA
EIPIAYVRQEIVDLGESNDEEDEDEEADSDATEENPHLAAEDHPSEDSQDRAWPDSPPPP
PPPYSPEATSSRRRRSPLDQRGKLRSPSPPGYVPSYYLQNMEEKKAEKNQIPLGGLDGVL
EKPSGLEGKNVMAAKTLISPALAASGQQSVMVYHRIIFVTRSAAAYYGMTHPSRLGERTP
DQMDYFCSKFSVETRKRWIEEHSKIYEDYVVEMDEFRRSLSPAERTSFRAFRNNRAGVLE
DGDTNSKSTSASLKSLEDFLKTKLFYEKKKLNLLQEGYAKLTAELNQGIDDTVTPLCIEQ
HGVIHLEDIYCWLTPKDSEIDESAAKELADAKEYARRMNAVPKEDDKIKELIEERAPYNQ
KFELCEALLSVGAWDQASILLEFHPDFFVTSYLPISSSICNLVDNVIELVYRTRCCTSPE
PSDKPVLPVGVCNPPKTAKEMKELRETAFPMLLSLGPHLYNYPVLPHKLIGLCNTALDDC
GLNSSKELPKDLDSLYINVRTLFDVVILPSLALLESNSSVAEEIWNVLKKLPCEHRHQLQ
SIEASEEMTKEHMEAMQGGELLRAEVAHFGQVRVTKKVAQRLKETLLESNLAIPLCDLIA
QQRGKSRQCPENRELDGKLYDQCQVTLVQLGTFSALNMSDDDHVRCRPQLESWLSDCHNH
ADVAFFLARPMFAHAINSKYDELRRAEKNLLPDQNTQKYLESVRLVMTPISRSVRPLFAA
QVWEHLSPQFFATFWSLTVYDLSVPNAAYEREVQRLEEAIQQKDENRDLPDSKRKKELDR
CTALMDKLLAEEKKQKDHNERIMARLAQEKDSWFLKSSQMETIIQFLRHTAFFLAAFSSR
QMPYFALALCRYVRLMHNLKTPNFSTLNCYDCIFLDITKTVTSCTENEANCYGRFLCAML
ETEMHWHSSKKIFDEECANYPGFVIKFCVGEQPPEKNDHVDFENYRHAVHKWHYKIAKAL
VVCLESKDYVQIRNALIVLIRILPFFPVITPLVGFIDRNVEVVRSEQRDKRQDLSEMAIS
YSGQLKNKKTSIPEHEFHLVTRKPVTKTAPRDREDHKERRFIKPRRNLVKGKASVKGELD
VSFCSKVTDVGLASLCVSVDHLGNKNEFLCLCKSIVKQWTNRTQVTNSGIQVAIENLPEL
EYCDMASIQISAEMHQRDFRSKEQLEIPKYSFVDLKLKKKYSSPYTCGSLKMVLSLCPSL
LKVHITTIAGLRNADLLSLISVERLCEQNTGVCGYFFELTTPRVPWCTRNQEINQTSST
Download sequence
Identical sequences E9HJI6
jgi|Dappu1|229018|estExt_fgenesh1_pg.C_1400028

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