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  Home > Genomes > Daphnia pulex > jgi|Dappu1|247827|SNAP_00015885

Domain assignment for jgi|Dappu1|247827|SNAP_00015885 from Daphnia pulex

Domain architecture

Domain assignment details

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Strong hits

Sequence:  jgi|Dappu1|247827|SNAP_00015885
Domain Number 1 Region: 408-520
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 7.46e-24
Family Spermadhesin, CUB domain 0.00075
Further Details:      
 
Domain Number 2 Region: 2795-2995
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.7e-24
Family Laminin G-like module 0.053
Further Details:      
 
Domain Number 3 Region: 537-636
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.15e-23
Family Spermadhesin, CUB domain 0.00094
Further Details:      
 
Domain Number 4 Region: 1040-1193
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.98e-23
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.01
Further Details:      
 
Domain Number 5 Region: 221-371
Classification Level Classification E-value
Superfamily C-type lectin-like 4.55e-22
Family C-type lectin domain 0.0014
Further Details:      
 
Domain Number 6 Region: 1512-1661
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 5.27e-21
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.0058
Further Details:      
 
Domain Number 7 Region: 636-756
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 7.46e-17
Family Spermadhesin, CUB domain 0.0012
Further Details:      
 
Domain Number 8 Region: 878-949
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000025
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 9 Region: 3348-3546
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000803
Family Growth factor receptor domain 0.0034
Further Details:      
 
Domain Number 10 Region: 1264-1327
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000129
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 11 Region: 2561-2680
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000439
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 12 Region: 2433-2563
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000659
Family Growth factor receptor domain 0.0097
Further Details:      
 
Domain Number 13 Region: 365-405
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000301
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 14 Region: 816-880
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000389
Family Complement control module/SCR domain 0.0022
Further Details:      
 
Domain Number 15 Region: 2290-2327
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000621
Family EGF-type module 0.0059
Further Details:      
 
Domain Number 16 Region: 935-996
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000834
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 17 Region: 2101-2267
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000157
Family Growth factor receptor domain 0.0064
Further Details:      
 
Domain Number 18 Region: 2404-2446
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000357
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 19 Region: 2701-2789
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000439
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 20 Region: 1401-1469
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000723
Family Complement control module/SCR domain 0.005
Further Details:      
 
Domain Number 21 Region: 755-827
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000135
Family Complement control module/SCR domain 0.0033
Further Details:      
 
Domain Number 22 Region: 1196-1234
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000164
Family EGF-type module 0.017
Further Details:      
 
Domain Number 23 Region: 2368-2411
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000474
Family EGF-type module 0.013
Further Details:      
 
Domain Number 24 Region: 3607-3648
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000051
Family EGF-type module 0.022
Further Details:      
 
Domain Number 25 Region: 2255-2289
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000106
Family EGF-type module 0.026
Further Details:      
 
Domain Number 26 Region: 991-1039
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000879
Family EGF-type module 0.0093
Further Details:      
 
Weak hits

Sequence:  jgi|Dappu1|247827|SNAP_00015885
Domain Number - Region: 2332-2368
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000866
Family EGF-type module 0.011
Further Details:      
 
Domain Number - Region: 1465-1509
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00598
Family Complement control module/SCR domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|247827|SNAP_00015885
Sequence length 3881
Sequence 
MDPSDRLTVTLFNELLAKDGVRHMVEFASWPSATANQTQLPTTTDSIATKNEMRENVTTV
DWAKQNAKVDGRNDDMINGERLNPLAVQSSVFYKSRIIPGESSCVDWRDWQEIQMHGVSP
KGTILIPPFHGTPIFVRRIHLAVDASRVSRQTWAQEEEEEKEKPVGILHQMWWWWWRWPM
RAHLLFQSRDNRLMFRVESGSMMALRRCRVALLAALVLLASSSVRSQENELFHCPDGWRL
QGLHCYRFFEVQHSWERAADLCKRYGSDLVVVESYQQNNISEKLAQEQLNPVTHPDAAFW
LGLMSLDDLSTNTLEAASGSLVQQYAGFWQVDQPDARKGQCVRASTANADQSWALSSCES
LLPFVCRAKACPKNSFLCSNGRCINGALRCDTQDDCGDGSDENACPEECHYHMVSSGDSI
ESPNYPGKYRPLADCKWTLEGPVGTSIVLQFTEFDTERTFDTVQILAGGRTEYSSVTLAT
LSGKQNISTQFFTSASNFMIVRFRSDATVEKNGFRASWKTEPVSCGEHLKALPQGKELTS
PGYPQAYPGGLECLYVISAPLGKVVTLIIEDFDMEPHKDYVLIRNGPESDSEKLAMLTGR
SDELPTYLQSTTEAMYLYIHTDLSDSRKGFRFRYSVGCDLSLEAANGTLVSPGYDMETVD
FRYPNNLECDYRLRAPGGSPLSLRFAEFQVDDTDSVQLYDGSSSNGVALSPAEGFRGKTE
PKGATFSAHSGDLLIRFKSDALRNDRGWKIMFSADCAELLLDENAIVSSKQRIFGSNVTI
TCPPGMEFATGVKKIMTECLNGGRWSTPYIPKCQAVYCGPVPQIDNGFAIAATNVTFGGE
AQYQCYAGFGFSSGQAIETIRCTGDGQWDMVPQCSASQCTPLPEVSHANATNLNGGGMNY
GSVIRFECEPGYVRTGDPVLLCQSNGTWSGAVPSCSKIQCRTFPEIENGWVSNRTRTYFF
GDETRAQCYRGYKLNGTTVIRCGADGKFANVPTCLDVDECGGSGGSTSSSSPCDQASATC
TNVPGSFQCGCRSGFIPNLDCRPVVDLGLGNGGVPNPSISVSSAEKGFPKENVRLSTKGG
WCGAESGSGSNWVMIDFKAPTVLRGFRTQPVLRGSSGVAFASSIRLQYADDADDLFREYK
SPEGAPVEFRIPEGTSIAVVNLPTAIEARYFRLVIQDYSVAPCLRMEMMGCTRTECLDVD
ECAVANGSCQQKCINNPGGFACSCSQGYDLYTQNGTAGFHILDSETGLRDGDLYRINKTC
VKKMCPAVKSPENGHMLTTRASHHFGDEVNFHCRIGYIMVGARSIQCTAAGTWNASVPEC
QPAQCVSLADDQSEGLTVARSSPADNQLVPYGQNITLSCNEPGRPLVRTPTSSFRQCVYD
PRAGFPQYWFSGAQPSCPRIDCGKPSETPGAEYGFFPDTRYKSSFFFGCQPTFTLTGQSS
RNDNVVRCMENGVWDFGDLRCEGPVCEDPGRPADGIQLATSYEQGAEISFQCTRPGYIPI
TSAPIQCVREPECSVVRPIGITSGRIPDGSFNATSERRNYEARKARMNSATGWCAQQEEA
FTYVSVDLGTVHRVKVILVKGVVTNDVVGRPTEIRFFYKQDPSENFVVYFPNFNLTSRDP
GNYGELAMITLPLAVQARFVILGIVAYDKNPCLKFELMGCPDEPEEDRLLGYDLGYPVCV
DNDPPQFLNCPNSAIRVKRSAEGMGVVDFVVPTASDNSGMIARTEVRPEGFRPPLTVFQD
TMVEYFAYDFDGNVAICQINITVIDEEPPLLQCPQSFVIELVEPQESYQVFFNETRRRVV
VSDASGQDVAVTFIPESAFIRVGSYENVTVVATDPSGNQQKCYFQVSVQPTQCVDWELKA
PANGAINCLPPSNRPAGSGGLECVATCNPGFRFTDGEPVKSFRCDVKQPWTPGHVVPDCV
TEETQQAMYNVVAKVLYRAGAATAAIPATCLSQYTTVVRPFYQALDRALSARCSAISVDM
NVTFVESQTEMHLVEDNIAEITYVLSIMPAVRQPQLYDLCGSTLGLVFDLSVPSTSAVLA
PLLDLAATSNAECPPMKAVNSSLSRGFACGVGEVLNMPAAANVPRCLHCPAGTSALSGAK
SCALCPRGFYQDQEQSGSCKRCPAGTFTRSEGSKTVDECVPVCGFGTYSPTGLVPCLECP
RDSFTGTPPPGGFTDCQACPADAPFTHQPAAPSVATCRPKCAAGTYSVTGLAPCAACPNH
FFQPMEGKMSCVECPGSAMTVGTGAKSRDECQPLACKEGFCRNGGLCLAQTHMAYCYCPS
GFSGRFCEVNIDDCASQPCYNGGTCRDQEQGYLCSCPPGYSGLQCQDEESSCNATTCNDR
SMCKNEPGQGQFTCLCRTGYTGPNCSSTLDPCAENPCSNSAQCIPLKQGRFKCACPAGWE
GPLCDQNVDDCAESPCLLGSNCTDLVDDFSCSCPTGFTGKRCETKVDLCQPSPCGDHGQC
VDHYFNALCICQPGWTGPNCTAQVDECSSNPCLNGGQCQDVEGDYQCLCPLGFTGKNCQH
NVDYCGVQPCQHGGTCTDALESFQCQCRPGFLGVQCEIDIDECLDNPCDPVGTDRCLDQI
NKYHCQCRPGFTGTLCENKINECAPVSPCLNGGVCTELVNNFKCTCPAGWTGQRCEKDIS
FCESQPCLNNANCINLLGDFFCACPSGTDGKRCETAPDRCIGDPCMNQGHCRDFGSGLNC
TCDSDYVGVGCQHEFDACSVGVCQNGATCIDNGASYQCVCPDGFSGRHCEQDVVECVPGA
CPLSATCIDLIDDFYCRCPFNLTGEDCRKIVQTDYDFFFSDETRRASASLVVPFVLGSSS
LTLALWVQFTNRDDLGNILTLYSVESSSTLRNHRIMAQVHSSGVHIALLPGIKDVFLPFR
VNLAINDGQWHHIALVWDGPHGAITLTTDGVIVGRVENYGVNRTLSQFGWMTLGAPNSAG
KTRTEHGFHGHLTRVHLWGRPLDVITDIPKQVRSCQSAPMLFDGLLLQWSGYDRIERGVE
RVMPSACGQRVCPLGFSGPSCASLDKDKIPPQVVRCPSDIWIETRNGSARVDWNEPQFSD
NIRLAQVEETRGIRSGNTLAWGTYDVAYVAYDEAGNSAVCAFKIYIVNEFCPKLADPVGG
SQRCSDWGPGGRFKVCSIECNAGLAFSVPVPKFYTCGAEGFWRPTEDPGVSFVYPACSST
KPAQRIVKIKLQYLSSVLCNEAGQSVLSDKVRQAIQKLNRDWRFCNAKGSQSAICNDLNV
NIKCQRRHGDLGVKRRRQADVNDDVYDLEISFPAESDPVTNINTQEKSTIERLLETIILE
KDDFDVRDSLPTTVPDPATLSISADFTCPVGQVVRVSECVACAPGNAFDMEKKNCKPCRV
GTFQDQAGQTQCKICPVIAGRPGTTFASGARSATDCKERCPAGKFYSEETQRCLNCGFGH
YQAAEGSFACRSCQAGLTTRTDQAISADECSEECPTGLQLTSLSNNATCEPCPKGTYRTK
GREMACQPCPAGFTTTRSGSATVEECSEPKCQPGSALSKENTCVLCQVGSYQPNAQQTSC
LPCPPDTTTKLAGATLKSDCSNPCSPATNQTICPVNGVCLFVASTNVHRCECKAGFTPVP
PDSPTDFTCMDKCDNFCKNDGKCRRDRATGEPYCQCTGSYTGLQCEAQSNFAYIVGGSAG
FVVFLILLVLLIWMICARTSRRRDSQAKAAANAAVVAGDPSGSQANFYYGSHAPYAESIA
PSHHSTYAHYYDEEEDGWEMPNFYNETYMKAENLHNVNKGNSLARSNASLYGNKEELYDR
LRRHAYQGKKEKNGNETTSERIQVSSFFWTLNCRFPNVVERVIAKISFGRVGYAHPLLQF
VHYEMATYRLYSVVPRLVRFVDYHLYSCDALQHNTNFSHLL
Download sequence
Identical sequences E9GSY7
jgi|Dappu1|247827|SNAP_00015885

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.