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Domain assignment for jgi|Dappu1|269232|SNAP_00037290 from Daphnia pulex

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Dappu1|269232|SNAP_00037290
Domain Number 1 Region: 102-227
Classification Level Classification E-value
Superfamily YWTD domain 0.0000000000000183
Family YWTD domain 0.0048
Further Details:      
 
Domain Number 2 Region: 651-698
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000547
Family EGF-type module 0.0047
Further Details:      
 
Domain Number 3 Region: 579-614
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000851
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 4 Region: 340-376
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000196
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 5 Region: 623-664
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000474
Family EGF-type module 0.068
Further Details:      
 
Domain Number 6 Region: 381-420
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000602
Family LDL receptor-like module 0.0027
Further Details:      
 
Domain Number 7 Region: 2-76
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase NM domain-like 0.0000769
Family Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 0.016
Further Details:      
 
Weak hits

Sequence:  jgi|Dappu1|269232|SNAP_00037290
Domain Number - Region: 423-462
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000123
Family LDL receptor-like module 0.004
Further Details:      
 
Domain Number - Region: 300-335
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00183
Family LDL receptor-like module 0.0022
Further Details:      
 
Domain Number - Region: 267-306
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00399
Family EGF-type module 0.011
Further Details:      
 
Domain Number - Region: 542-563
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0072
Family LDL receptor-like module 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|269232|SNAP_00037290
Sequence length 739
Sequence
MYKLYGYKFFSSATDADTALTLARVVDPATDKITSGSKGFLLFLVYMDQPSNLHLMRLKQ
KLGTKLDALGYLSADDPIRKRRHGRGIGLTRGTVVIGQKNHDGVYERLVLARYLYSPQGI
TIGSQSGRMFIVEGRISHVISVWHMDGTNRQELVQVYGTVSAMTCDGKHFYFSDSLRGTI
ERIEVNGENRTILRFHLGTPVAMDASSDSVFWLTQSSTRISWLNKQETKTMRGFVIDASD
DINVQYRLMSVIDLFDFNSHDHHFFHHTGGCSDICAPTPDGPDGVACLCPLGKVLGEDKH
VCTKADCVASCIPAKFRCDGVNDCARLGEDELQCRNTTTEVGCTSSQFQCINGGCVSIHY
NCDGDADCRDRSDEPDSCPPYVCKGEGEYSCPNPHHCIPRSAVCDGQADCIDKLNEANCS
STHSMCSSTQFYCSHSHIYIPLTWVRDRDSDWQHGEDEDSSVCDSVVNKPPCPINYLRCP
QRPDCMPRIECEHGTDADLCAKLNDSFIETETEKPDCLSSQYNCFLGSNECIPITSRCDC
RIYISWVCDGLSDCSNSADEALLLCPANVSTSSSSTTKITRSCSATDFMCLSGECVQASS
VCDGKFDCFDGTDEGSGCAKACQNNGQCPQICVPGPMEPTCLCEPGYESLNNGKQCVDID
ECAFEFNKCSQFCNNTKGGYRCSCASGYSLEPDQITCKAASGRPMLIVATNHPVEILLNS
DITSSRFLVQSVPAIKGIA
Download sequence
Identical sequences E9HZ18
jgi|Dappu1|269232|SNAP_00037290

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