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Domain assignment for jgi|Dappu1|306823|PASA_GEN_5300102 from Daphnia pulex

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Dappu1|306823|PASA_GEN_5300102
Domain Number 1 Region: 387-500
Classification Level Classification E-value
Superfamily C-type lectin-like 9.18e-47
Family Noncollagenous (NC1) domain of collagen IV 0.00000371
Further Details:      
 
Domain Number 2 Region: 280-387
Classification Level Classification E-value
Superfamily C-type lectin-like 8.48e-43
Family Noncollagenous (NC1) domain of collagen IV 0.00000801
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|306823|PASA_GEN_5300102
Sequence length 501
Sequence
MQGEPGISGLQGPPGQTVKGEKGLPGLNGKQGRDGIPGIAGEKGEIGFPGLPGNRGPPGA
NAPPGQQGDVGEPGPTGSPGLSGRDGPPGRPGMDGLPGVSGPKGDVGPQGQPGYPGEKGD
RGNNGLPGLPGQSGMKGDRGFDGLPGLPGPAGFSGEKGFPGPAGPTGPQGLVGIKGDRGN
PGLTPPPGQKGDSGLPGQPGRPGMPGTPGLDGQPGIQGIKGDKGGNGRDGQPGIAGPIGP
KGDRGFDGRQGLPGYPGTIGEKGDAGRSCEQPSVFQSGFLVVKHSQSTTVPFCESGQVEL
WKGYSLLYTEGNEKAHNQDLGFAGSCVQRFSTMPFLFCDANNVCNYASRNDKSFWLSTNA
PIPMMPVSDAAIRPYISRCVVCEAPTNVIAVHSQSVNIPECPQGWGSLWIGYSFVMHTAA
GAEGGGQSLSSPGSCLEDFRATPFIECNGARGTCHYFANKLSFWLATVEEQTQFDRPQSE
TLKAGNLRSRVSRCQVCAKNS
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Identical sequences E9GYE1
jgi|Dappu1|306823|PASA_GEN_5300102

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