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Domain assignment for jgi|Dappu1|320145|NCBI_GNO_3300161 from Daphnia pulex

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Dappu1|320145|NCBI_GNO_3300161
Domain Number 1 Region: 980-1284
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 1.34e-43
Family Complement components 0.00064
Further Details:      
 
Domain Number 2 Region: 1372-1504
Classification Level Classification E-value
Superfamily Alpha-macroglobulin receptor domain 0.0000000000222
Family Alpha-macroglobulin receptor domain 0.008
Further Details:      
 
Domain Number 3 Region: 671-704
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000641
Family LDL receptor-like module 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|320145|NCBI_GNO_3300161
Sequence length 1546
Sequence
MFVLPDAEGLIVKALITKDGGQHIASAIETIDSGVSHNLLLKIPGSLTDGQYQLKLDGYD
LLQPQKSVFSKRGHLEFHPDFLSILVQTNRKIYKNEMKVRFRAIITQLVNLKPYSDPVTV
YILNPEGFVMRRWPSRYPTTGVITLLYQLPTFPSEGKWTIRVEAMSQIHDHHIIVERFYY
RFFDVIPSAPAYVLDSDESYTAAVTTSFHPGRVASGNLTLQVYARPVNSSLADFRFVRQD
FHQWTYDFTYNVQLEEVKRSVGVSSLTGWVIRVAMTLYHHFEGESRNGFIETRIIRAQLK
FRFGGSKTAVFKPGMPYEGHVYLMYDDDEAVSPEKLAGATLTIRPVATTSNGQLKTLPEI
VVPRQGEYHRSSDDDHLNYYGNKYDVWMDRQMEDAEYKTFRQFGIHHFRFTVPKDATSLK
ITAYYKDDEGDQVSVDQQAVAFYSLGNFFVHVSTSTDEGLLGHFATIHLRSNFAFQDYSY
VISSKGLVVHGATETLAHATKSLTFSVPVSTDMAPTFKLVAMMVSPLGDLVADSVTIPVQ
SINRYKTNLTMVQTKDHSKLTVQVVTRTLPGAFTGVSLIRSANYMFQADNEITYSRMIRA
LYQLEPFSRSVSGITWTDREGSKADKSQYFKSANPGADTKRTFNLAGLLVFTDARISQYP
DTANCNKANGYEPCMAVGCFHKDQRCDGKSDCTDGSDEDDCPLTKDDRMDFRMFRRNRFH
DFYDWLDGDWAWFDIPVTDDGFDFNDRSVALTNEVWFLNAFTFHRELGFAVVDDVVEYEG
SLPFYVSVESPSFIRRGETVGIRLLFINNLQVDTMGLIILEASDDYCFVETEAHGEVAHY
HPSLVCAEKHHVVTVKGGTTTEVFMPISPRIEQGSITVKIQVLSHIFEQNLEIGLEVLPE
GATISRHTSLLLDLKNRAHLLRFLDIPVEESPIIPYSKFRRYVFGSPRASITLCGDVFGP
VFPSTPITTDSMLSRSLRGTEANLYNLATTSWSLHYLRLTNQLVSDVLYSGLNDMNVQMA
ELMRLYHHDGSFRAHTNSNPSVWVTAWVIRILGQSQFQDWENHYYVDQQLLTNSVKWILQ
FQRRDGSFGETENYISPLDRRLLPRYNSTFKGGHTAHVLLSLCATSESLDGAVKVATASA
KVRAVRYLERILDILTDQYELAIVTYALQITSSPAQEAAFGRLHILRREEEGMVYWSREP
VPSNKILYENQRPFLQPRLPMHQDAVAVEATSYALLVYLARDGIGDLQERVVSWLNTMRM
VDGGFVSIYDSIVAMEALTEYAYRARLRDITDMSVVVEASASPDATELMKINSDTLATVH
RMDIPNVWGHVNVIGRGAGQAVLQLKVQYGIDWEDLRDTPKRRYFDLYVEETYSHFRNKS
HITVDACVKWLAMDEAPVSGSTTLEVELPSGYRIVQSDADQVLIHKNYTFLRDVFVSDEK
IVWTFDKVGPERLCFNYLIRRWFPVANGTMYRSAIVYESHSPEHFEMQVFNATPLYVLDI
CEVCGSYQCPYCPYFSAAPVVVSFNPIIVFCSLLISANICLNWSTS
Download sequence
Identical sequences E9GNZ6
jgi|Dappu1|320145|NCBI_GNO_3300161

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