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Domain assignment for jgi|Dappu1|323464|NCBI_GNO_5400078 from Daphnia pulex

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  jgi|Dappu1|323464|NCBI_GNO_5400078
Domain Number - Region: 60-94
Classification Level Classification E-value
Superfamily HMG-box 0.00883
Family HMG-box 0.01
Further Details:      
 
Domain Number - Region: 175-207
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0357
Family Classic zinc finger, C2H2 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|323464|NCBI_GNO_5400078
Sequence length 342
Sequence
MDSFLSISGKSGIVKLDIDGWKKEFVKLHELNQQLKDMETLAGLPIALFTKTIFMTLDTT
NTNLKELNDFIGKNWQETSLEIKQLFYSKAHNDLQITRARQKWLIQKISFVKKTIMDDSI
DFQSMELEGNKEIVHFSIPETKVAQLICRYPRCNSKLVTTASRSSHEKSQHSPKKYSCEK
CNFVAKMEESIEYHKLMMHHGLKANKLSRNVEVLKFSNEQNSDLVDTLVQNEAMSIDEVN
DDSRALNVTTYEEFMLTITQLFMHCVKVYAYHYAAVYDWTYPHIVRYGVGYPDSISTEST
TPVPTGPVPASSPETMPLENFKAAGDEFFFTWTSPMLLMERK
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Identical sequences E9GYX2
jgi|Dappu1|323464|NCBI_GNO_5400078

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