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Domain assignment for jgi|Dappu1|99793|fgenesh1_pg.C_scaffold_13000046 from Daphnia pulex

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Dappu1|99793|fgenesh1_pg.C_scaffold_13000046
Domain Number 1 Region: 700-906
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 8.9e-16
Family Complement components 0.014
Further Details:      
 
Weak hits

Sequence:  jgi|Dappu1|99793|fgenesh1_pg.C_scaffold_13000046
Domain Number - Region: 1067-1169
Classification Level Classification E-value
Superfamily Alpha-macroglobulin receptor domain 0.000955
Family Alpha-macroglobulin receptor domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|99793|fgenesh1_pg.C_scaffold_13000046
Sequence length 1200
Sequence
MSSRRKKKEKSRHNTNTVAVQRREAPLIRRLHRVVHGTLKSIEGQPLDSQFVLASHSLGV
STWPESGDSGGNCNVQLFSQNGKYRFTEGETLHLSIYSGCKLVGNRINYAVISRSSGHVI
SWGQEYLVAMTAGSIVQTGNQSDADDESKWAAELNLSIPVIYEMIPRAIVTVFFSHDDGQ
HLASSSLDVQVYNNVETKVTVVGVKGNKVRVNMTLKLGSYHCLFGSWADKGMANSAEVQS
PKLLGPSIETDRFLRLLPKFQAPPTPWQLFGQSSELWFVQCFDPSESTTKEMDLVVASGS
DPQLTLLTVDRNGRVRQSSPVTILIKPVDWSIDFQLPESVRVGEELVVDVTLTNRFQNCS
QTQLQMALTGGAGFVANGKKYLQQPACLAPKSRAVYRVGILVNELSPLVTLTVQLKGSSS
GACCAPSQVINLDVHLEQMETLPVSKSVRVSSTEFQHSQSDSYLFCLEENVFVSNASSFK
YEVLPLGSHVKTIVFQASAPADLRVVLGSSDKFDDDEAISYHLVMGGEDNMYSWISKQMN
GLSEIKTKIATPKILRQDRLQTFWISWDQIKLGRKKRNKPSIPLADQNRWLLSFGKGSHI
GVRPLASIPLEAGDTPFRYIGFSTSWGFRGFFRVWGADGAIDQTTRTLNVPKPVPGRVSG
EQAEITVKGGIASSLDDMWSATGSTDPSTLGTVLERFHHNQYAKKPAGKEDTSWNGILQN
ILSFRSADGSFHDADGPSDLRLTALTVHALSSITLQRYSDPDLLKSALTWMHGQQNDDGS
FADGPNVTQSQRIETTAFILTCLSDVQHDDIVLFQVSSAAQRFLERELAASREMKTIVPI
ATAVLVSHSSAWPETLAKLDSVYDELIDCYLNDRKQCLNEMTYALTAYSHQNTPDKVLEM
VRILVSAPWQTLHPLDKLRMMKAWSKYSQVLNDPVRNLNMRLTFQNGEVTLIQSHHLSNE
SALGNASTPPQMDYDEENVIAGTSDNETRSESQEEQQNVRMHTPALTYDIPSLPQNVEVT
LSGTGCAIIQTKVYWKTVEPPIVDGSLLSLYTSVESVGLDENEEPPMALNATICVHWNGT
SSTDLKIRLEMFSSYVVSSLDAEDNSSEIGLKKLPNSEVVVDIAQVNPNCGRCFRLRAGR
TGLVRNIQPGRIDLWEKNRPQFHHHWLLHGPDNSTLWAGTRSSIDHSNKWLAAKPQTCSS
Download sequence
Identical sequences E9G8A9
jgi|Dappu1|99793|fgenesh1_pg.C_scaffold_13000046

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