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Domain assignment for jgi|Dappu1|229736|estExt_fgenesh1_pg.C_2620018 from Daphnia pulex

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Dappu1|229736|estExt_fgenesh1_pg.C_2620018
Domain Number 1 Region: 1052-1378
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 1.28e-66
Family Complement components 0.000078
Further Details:      
 
Domain Number 2 Region: 1463-1583
Classification Level Classification E-value
Superfamily Alpha-macroglobulin receptor domain 9.16e-25
Family Alpha-macroglobulin receptor domain 0.0016
Further Details:      
 
Domain Number 3 Region: 760-794
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000367
Family LDL receptor-like module 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Dappu1|229736|estExt_fgenesh1_pg.C_2620018
Sequence length 1640
Sequence
MKPFFGAASSLLLLVLLDSTAAQQRQQQQQQQSPPTQSTRINFQDPIRDNNQRPNLFNNN
IDPFSRRPFGVGDNTNAIFEEPTYFIVASRIIRPSQIYRVAVSILSSPITLSVRASILRN
GVDIGSATQECKPGIPETLLIKIPSTTVPGQYRLRVEGNTDRALGGTAFLNETLLNFSQR
SMTIFIQTEKPVYHQSQIVRFRTIPINTELRAFDDAVDVYMIDPRGFVVRRWLSRQSNFG
AVSLDYALSDQPTFGEWTIRVTAQGQTEEEHFHVEEYYQTRFEVNVTMPAFYFDSDDFIH
GTVMANYTSGAPVRGNLTLKATFKPIRATPLIPDRPGSIRDSVIERNLTFKEFRGFYTFK
YPMAELQRMVPKLDGIELRITAIVGDRYREDYVEGFSTARIYNSSLKLNFLGGSPQVIKP
AMPFTCFLAVSFHDGSILPAERFRYDRLEIRPTVQFRSSASRTLEVREAKALPEQPGIWE
FTIDLRSELAQTTGSNVGTGDKRVKDLVNEISALKLIANYKDGYGERATAEMLAITHYSI
GDKHIKVLTSTRSPKVGEYLILHVRTNFYAETFNYIVVSKGIVLVTGSQSSSPSVTTLSI
PLSAEMAPVATVVIYHVAKYGEVVADSLTIPVNGISRNNFTLTLNPMKDKTGDTVEVVVL
GDPGSYVGISAIDKGFFNMQAGNELSYAEVITKMTSFDESLNGTLRHYWTSREGDAETVV
NYPASTFGIDANRTFEYASLVVFTDAFVVRRPDACNITLGFLACMSGSCYRSERRCDGQY
DCDDRSDEAGCPSNIRRELAQYRLKRINRLLRMYENSWLWKDINIGPHGHSIFSVQIPEI
PTHWVVSAFSVSPKNGFGLVRSSREFAGYRPFYMNVEMPTNCRQGEQVGIRITLFNYATI
EADVVVTLADSPDYKFVHVEEFGEVKSYEARTSRGEKQHLTWIPAQGSQVVYIPIVPTKL
GEIEVTIQAKSLIRKDQVVRRIRVEADGVPQFRHTSVMLDLSNRAWFLQYVYVNVTETPI
IPYEKDRYYVFGSNRARVSVVGDVVGPAFPNMPVNATSLLTLPMDCAEQNMFSFAANLYT
VKYMRLTTQRKREIDRQAFYHLNIGYQRQLSFQHRDGAFSYFRADWDYSSKSVWLTAFCA
RILAEANFNEWENYLYIDPGVIAKAVDWMIQFQSPEGAFYEVAPRFADRKMNSTTSWGFN
DPIRYRNISLTAHVVIALTTIRDLPGELGPRVAVSRSRAISWLDRNLNLLEKFGDPYEVA
IVAYAMMLAKSTSAEAAFGLLQQKAREDGGYKYWGREPVPLPAQRLENQRPFLLPRLPNA
FDAANVETTAYALLTYVGRQELFVEPIVKWINTQRLTDGGWASTQDTIIATQALIEYTVR
HRIREVTSLTLHVEATSNPQLQRTMYITENNLATPQFMDIPNAWGTVKIQARGAGYAIAQ
LSLQYNVDVNRFVTPPAVRAFSVVPRLSFSGRNNSHINYDICSSWTNQRESNQSGMAVLD
VAVPTGYYMQQQVLDEYILSRKVRNLRRAKFLDHKVVFYFDALDGDDTCVKFTFERWHPV
ANMTRYLPVRVYDYYAPERFNETVVQTYELYVMDICQVCGSYQCTYCPTYNHATRGLMTS
SLTMIAALLISLVFTAIYQR
Download sequence
Identical sequences E9HTS4
jgi|Dappu1|229736|estExt_fgenesh1_pg.C_2620018

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