SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|298492188|ref|YP_003722365.1| from 'Nostoc azollae' 0708

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|298492188|ref|YP_003722365.1|
Domain Number 1 Region: 3-184
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 1.76e-21
Family N-acetylmuramoyl-L-alanine amidase-like 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|298492188|ref|YP_003722365.1|
Sequence length 450
Comment cell wall hydrolase/autolysin ['Nostoc azollae' 0708]
Sequence
MGRIFISAAHGGREAGGIDSGAIAGGTTEAKEMILLRDLIVTEIRVRTVEVLAVPDDLSA
AQTITWINSRGRTGDVAVEIHTDAAGSPTVRGAGVFYIANNNQRKQNAEMVLMGLLRRVP
QLPNRGVKPDTDSGLGSLQFCRQTNVPALLMQVGFISSPDDHSLLQTRRRDFALGIVDGL
VAWSRAVDPNPGTPPQRTYPPINININGRNYAEQGVLINGNSYIPIDLVDRLRIDLSKSP
NVVRVTYQRVVYIKAIELREFNVSIEWDSATKTLNLRSILSVCPGQINQIVSNGNTTELQ
LQLFLRNNNENALVQFPDIPKLYREEAAMEGVNHDIAFCQMCLETVFLRFGSDIKPQQNN
FAGLGAIGGGTQAASFSSARIGVRAHIQHLKAYASLEPLVQQEVDPRFRFVTRGVAPSVD
QLSGRWSADLDYGTKIKAMFKRLYESAKLI
Download sequence
Identical sequences D7E424
gi|298492188|ref|YP_003722365.1| WP_013192256.1.25658

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]