SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|219850813|ref|YP_002465245.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|219850813|ref|YP_002465245.1|
Domain Number 1 Region: 33-151,184-429
Classification Level Classification E-value
Superfamily Pectin lyase-like 2.23e-22
Family iota-carrageenase 0.088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|219850813|ref|YP_002465245.1|
Sequence length 587
Comment hypothetical protein Mpal_0129 [Methanosphaerula palustris E1-9c]
Sequence
MRILQPALPVGFPIREVERMRGKWGIEVIIGALLVLCLIQSVAATATVVVAAADASQTSK
ETAQVFCDGVDDQIEINNAFNMLPAEGGIVQLTEGTFHSSGWIYPTANSQFLGAGEDKTT
IDVYNAVDPYQPIHIYQDNVLVKGFTLRGEGFFLIRTNHVTLQDITATSIGANGIRYPSG
GNGMFFIWVDNDHTGEITFQNCKAIDCNTHGFNMNANRSTMQDGTRVGSGSYAISNLKFI
NCQAVRCGFGVPDGSSSEFATGFDIQEDNDLQNVEMDNCLAEDNWENGFHFEPGYLNTKN
VVLNNCVSRNNGQRNPAQAPYHDVFVSGYYIHRNAILNNCISVNNKNAGFFVHDGLNTTF
NNCVDQGSTYGFKIVKGCADITLNNCQARNDKGWALWSAFTKNLQVKNFFQANAAGESGY
QDNLGYYYSQPQYELPVEGSSFDITAYGSSLPIINKDGSGNTYSLKTASADQLPTMPADI
IAATVPPVYVTGSVVAVSTTPVTIVATTTPVATATPVVTQVSTSSDPWSSIGKGTGFSSG
GFGTFGGASAFQSGGLNKLQVTTSTSSFRATAIGSSWGGFGGRSYAF
Download sequence
Identical sequences B8GIH1
521011.Mpal_0129 gi|219850813|ref|YP_002465245.1| WP_012616841.1.75456

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]