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Domain assignment for gi|219852393|ref|YP_002466825.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|219852393|ref|YP_002466825.1|
Domain Number 1 Region: 304-390
Classification Level Classification E-value
Superfamily PKD domain 2.49e-29
Family PKD domain 0.00038
Further Details:      
 
Domain Number 2 Region: 401-515
Classification Level Classification E-value
Superfamily PKD domain 2.75e-21
Family PKD domain 0.00061
Further Details:      
 
Domain Number 3 Region: 794-848
Classification Level Classification E-value
Superfamily Type I dockerin domain 0.0000000942
Family Type I dockerin domain 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|219852393|ref|YP_002466825.1|
Sequence length 848
Comment PKD domain-containing protein [Methanosphaerula palustris E1-9c]
Sequence
METMPDTKHTIQTYLMVILLLTMALLVAPAGAELVQSNGTTSIGVDQTQELKDTAAFSAN
KHVFFNVANDAGVKYNYDGALYSGPSNTYYMKFDGGGLNALHITSDPASPYGNVIASNAQ
SGTFFLSDTGGRGFDDDGILMIAVKGDVPNDFRVHIRASGYTWTPATSGVYNPTIPSSVT
YQPVSLDETFTRDDLIYGPQNWKPCSVANYPIYNGQDMTNTQDTYQMMFVDLKSGIIGKN
STAGAPALTDNGAIRVDYSFENLNTFAAFDAFAWCSASNQGQGITWTNEVAAAGSSSGSA
NGYTVTGVPRAPVAAFTANTVSGPAPLSIGFTDQSTNTPTAWSWNFGDGTTSTEQNPSHT
YTTDGTYSVALTASNAGGSNTVTRTSYITVRSTTPTTGPTTVPTTGNTTVPTTVTTIPTT
GTTTVATPTPTITTPPLAANFTANVTAGQSPLAVQFTDSTTGAVQSYFWQFGDGGASYDR
NPVHTYTTAGTYTVSLIVSGPTGTQVKTNEQYITVTAVVPTMTTVAPLTNYHHNYLQVSN
TEGARFDLHNNGTYYQKSDGGGTNAIWMTGTPSVPQGQTINTTNQSGVFYLTDTGGRGFD
DDGILMLAVNGTIPDDFKVHIRASGYAWTPIPNYLSPTANDITYVDGSIDEIFTKDDFIY
GPQIWKPAGQANYPIYNGQNLSDTQNTFRLMFIDLRAGILGKSSKAGISTLQNNGAIKVE
YSFDHLNTLAAFNAYAWCENSTLGEGISWTNGVNAIGQSSVASGYTVSGMSTSTAPITIP
SATRPPTDPNRDGLYEDLNGDGVADFNDVVLFFNQMDWIAVNEPVTAFDFNKNGSVDFDD
VVLLFNML
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Identical sequences B8GK31
WP_012618421.1.75456 gi|219852393|ref|YP_002466825.1| 521011.Mpal_1796

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