SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|219852554|ref|YP_002466986.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|219852554|ref|YP_002466986.1|
Domain Number 1 Region: 23-324
Classification Level Classification E-value
Superfamily Calcium-dependent phosphotriesterase 1.01e-37
Family SGL-like 0.016
Further Details:      
 
Domain Number 2 Region: 631-781
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.2e-25
Family Family 6 carbohydrate binding module, CBM6 0.00099
Further Details:      
 
Domain Number 3 Region: 309-410
Classification Level Classification E-value
Superfamily PKD domain 6.02e-25
Family PKD domain 0.00045
Further Details:      
 
Domain Number 4 Region: 411-497
Classification Level Classification E-value
Superfamily PKD domain 4.45e-22
Family PKD domain 0.00033
Further Details:      
 
Domain Number 5 Region: 489-574
Classification Level Classification E-value
Superfamily PKD domain 1.22e-19
Family PKD domain 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|219852554|ref|YP_002466986.1|
Sequence length 786
Comment carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Sequence
MRFQAVRMRLFNRMRIFFVICVLLLLLSGVGVVGALNPLPYSLQWNGTEIGSLGGGLHAP
GSVAVDDAGSVYVSDSANHQVQKFTSDGIFVKNWSNPVGNTGDFWYPVGIAVDPTGANVY
VSDLESNRILKFTSNGDFVDEWNTSGGDPYGVAVDRSGHVFVAEVYNYEGGLGQVQEFAP
SGDLINNWSPGGKKNPLGVAVDSNNNVYISYFNSNQIRKFTSNGTWLATWGRADGVHGSN
ATEFWAPTDIGVDGDDNVYVADTDNNRIQIFNAAGLPLGSLGNTAPHSGQGSGAFNRPSD
VAVDSTGTVFAADTGNNRIQRFGVVRAPTPTISAGFYAIGHIGQAPYPVRFLDQSVGSPT
AWHWDFGDGSTSTEQSPTHIYNNTGAYNVALTASNDLASDTAIQYRCIIVNTVPVANFTS
NATAGQTPFTVQFTDQSSDASGYQWQFGDGTTSADKNPVHTYSHPGTYSVTLTITSGDYG
SVFTEKSGYITVTDPPTVGFSANVTAGLFPLAVQFNESITGSVQYYYWQFGDGATSFDRE
PIHVYNVAGRYTVSLYAIGSNGTQEKTVEDYINVISPITPTPTTPAPVNTTPVPTTQVPT
MTLTPVPTNTTLVPTVTTIVPTVTGSPYNGPHNIPGTLQAEDYDLGGEGVAYHDTTAGNE
GGVYRHDDVDIEQLDTDGSPNVGWIRSGEWLGYTVNVSTVGTYSTSTYDARFRVASSHFG
SSILVYVDNGTTPVANVSVPNTGDWQIFKTILVSIPLPAGQHRLVLKFPTDNVNINWITF
TSRGVE
Download sequence
Identical sequences B8GKW7
521011.Mpal_1960 WP_012618582.1.75456 gi|219852554|ref|YP_002466986.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]