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Domain assignment for gi|219852555|ref|YP_002466987.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|219852555|ref|YP_002466987.1|
Domain Number 1 Region: 690-835
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 4.62e-30
Family Family 6 carbohydrate binding module, CBM6 0.0012
Further Details:      
 
Domain Number 2 Region: 315-397
Classification Level Classification E-value
Superfamily PKD domain 2.09e-24
Family PKD domain 0.00047
Further Details:      
 
Domain Number 3 Region: 395-477
Classification Level Classification E-value
Superfamily PKD domain 3.92e-22
Family PKD domain 0.0004
Further Details:      
 
Domain Number 4 Region: 479-561
Classification Level Classification E-value
Superfamily PKD domain 1.22e-19
Family PKD domain 0.00075
Further Details:      
 
Domain Number 5 Region: 584-662
Classification Level Classification E-value
Superfamily PKD domain 0.0000000000000471
Family PKD domain 0.0019
Further Details:      
 
Domain Number 6 Region: 126-201
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.000000608
Family Starch-binding domain 0.092
Further Details:      
 
Domain Number 7 Region: 218-319
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000129
Family Carboxypeptidase regulatory domain 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|219852555|ref|YP_002466987.1|
Sequence length 840
Comment carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Sequence
MTDLLKRMTWPLIMLVIVSCLLMIASATADPVTPSIIDCTPDHAMANNTWVSFTLNCTGF
SGTPTVWLAMAGQTNISASSEELDGTTITGYFDLLNKVPGSWEVWAANGTDPGVKWNGTF
TIDPMPTVNLTGKVVDHFTGLPLSNVVIYNFDYGPSTVSQADGSFTLPDAWVIEGKANLD
VWAAGIYRDNYTDVSVTEGDLQRGSKDIGTIELYPIFAGFVTDKITGKPLPDAHVSLIIS
SSEPVLASGVSNSQGYYVLQITDANSGSDKKLRDAGVESQIPGLYLTAEKDGYEPYSTGL
SLISLGEDYLYNIELTPIFTADFLASGHVGQAPFSVRFLDQSTGSPTIWRWDFGDGTTST
EQNPTHVYTRTGVYTVFLITANDWATDICTKSRCIVVNTVPVANFTANATSGSTPFTVQF
TDLSTGAESFEWQFGDGTTSTEQNPVHTYTQPGTYTVTQVVSRGEYGSVFVEKPGYISVS
NPSTIGFSSNVTRGPSPLAVQFTESTNGSARYFFWQFGDHATSNEPNPVHIYSEAGQYTV
SLYAVGSNGTEVKTVENYINVTSPVIPTPTVTTTVTPTPTERDLPVANFTITSQGGPGSL
AIQVTSTAVNATSVQFDLGDGTTTAYPNFQYTYWQAGTYTIKQTATNGAGYSTKILTVTV
PAVPVTTPTVSPTVTVSPTVTVTGSAYNGPHTIPGTLQAEDYDLGGESIAYHDTTAGNEG
GVYRHDDVDIEVLDTDRSPNVGWIRAGEWLAYTVNVNATGTYDAGFRVASSHSGSTVQVY
VDGGSTPVATVNVPNTGDWLTFQTVQVPVTLPAGQHRLVLKFPTDFANINWITFAQNGGV
Download sequence
Identical sequences B8GKW8
gi|219852555|ref|YP_002466987.1| 521011.Mpal_1961 WP_012618583.1.75456

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