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Domain assignment for gi|219852572|ref|YP_002467004.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|219852572|ref|YP_002467004.1|
Domain Number 1 Region: 674-819
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.58e-33
Family Family 6 carbohydrate binding module, CBM6 0.0013
Further Details:      
 
Domain Number 2 Region: 221-310
Classification Level Classification E-value
Superfamily PKD domain 1.44e-23
Family PKD domain 0.00049
Further Details:      
 
Domain Number 3 Region: 308-392
Classification Level Classification E-value
Superfamily PKD domain 1.03e-22
Family PKD domain 0.00039
Further Details:      
 
Domain Number 4 Region: 391-474
Classification Level Classification E-value
Superfamily PKD domain 2.49e-20
Family PKD domain 0.00093
Further Details:      
 
Domain Number 5 Region: 499-577
Classification Level Classification E-value
Superfamily PKD domain 0.0000000000000392
Family PKD domain 0.0017
Further Details:      
 
Weak hits

Sequence:  gi|219852572|ref|YP_002467004.1|
Domain Number - Region: 125-169
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000942
Family Cna protein B-type domain 0.028
Further Details:      
 
Domain Number - Region: 36-79
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.00114
Family Carboxypeptidase regulatory domain 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|219852572|ref|YP_002467004.1|
Sequence length 823
Comment carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Sequence
MMTLMKRMTWLLIVLTLISCLLLIAPVSAGPAATTNLTGTVVDQFTGLPIPGVEIDTKEG
TAYSLADGSFSLPNTIVGFDDGQYFVKLDFQDENCYDEYRTTVNVTEAEVYHSKDLGTIK
LTPGVAGYVYNSVTHQPVSDVQLTLTDPSSGDFLISSTTSKNTGYYIFPLNLNEQGLNHF
NGSTISYGYIPPNYTLTAVKNGYQSYSNSEIRITYKGSDDGVPHNIQLVPIFTAGFYAFG
HVGQAPYSVRFLDQTVGSPTAWKWDFGDGTTSTEQNPTHIYNQTGAYNVVLTASNDETSD
TCTQYRCVIVNTVPTANFTANVTSGPTPLTAQFTDESSTASGYQWQFGDGATSTDQNPVH
TYTQPGSYTVTLVISSADYGSVYTQKTGYITVSDPPMVGFTANVTAGLAPLGVQFNESIN
GSVQYYYWQFGDGGTSFDQNPVHRYDTAGRYTVSLYAIGSNGTQVKTVDDYINVTAPVTP
TPTVTVTSTVTPAPTATGYPPVANFTVTPQGGAGSMGILVTDTSVNATSVRYDLGDGTTT
AYRNFQFTYWQAGTYTIKQTATNAAGSSNKTISVTVPTVPVTTTPTSEGGDQGWYTIHCN
VDGATVLFDQTTKGTIAQGILKIQVYTTGTPYRTYTVQKDGYTTVSGTITDHPGKDQNVD
ITVNLTPTGQAYNGPHNLPGTLQAEDYDLGGEGVAYHDTTPGNEGGVYRHDDVDIEQLDT
DGSPNVGWIRAGEWLAYTVNVSTAGTYDAGFRVASSHAGSTVQVYVDGGTTPVATVTVPN
TGDWPVFQTVSAQVTLPAGQHRLRLVFPTDYVNINWITFALRG
Download sequence
Identical sequences B8GKY5
WP_012618600.1.75456 521011.Mpal_1978 gi|219852572|ref|YP_002467004.1|

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